Cellulomonas wangsupingiae: NP075_05720
Help
Entry
NP075_05720 CDS
T09069
Symbol
ligA
Name
(GenBank) NAD-dependent DNA ligase LigA
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
cwn
Cellulomonas wangsupingiae
Pathway
cwn03030
DNA replication
cwn03410
Base excision repair
cwn03420
Nucleotide excision repair
cwn03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cwn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
NP075_05720 (ligA)
03410 Base excision repair
NP075_05720 (ligA)
03420 Nucleotide excision repair
NP075_05720 (ligA)
03430 Mismatch repair
NP075_05720 (ligA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cwn03032
]
NP075_05720 (ligA)
03400 DNA repair and recombination proteins [BR:
cwn03400
]
NP075_05720 (ligA)
Enzymes [BR:
cwn01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
NP075_05720 (ligA)
DNA replication proteins [BR:
cwn03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
NP075_05720 (ligA)
DNA repair and recombination proteins [BR:
cwn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
NP075_05720 (ligA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NP075_05720 (ligA)
MMR (mismatch excision repair)
DNA ligase
NP075_05720 (ligA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
NP075_05720 (ligA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_ligase_aden
OB_DNA_ligase
Nlig-Ia
HHH_2
BRCT
DNA_ligase_ZBD
HHH_5
PTCB-BRCT
Zn_ribbon_TFIIB
HHH
Motif
Other DBs
NCBI-ProteinID:
UUI66972
UniProt:
A0ABY5K952
LinkDB
All DBs
Position
1230095..1232470
Genome browser
AA seq
791 aa
AA seq
DB search
MGHVSDATPVTDEHDVPAEARHRWTELAEQVRADQFAYYVRDAPTSSDAEYDERMRALER
LEEEHPGLRTPDSPTQRVGGTFSTDFAAVEHVQRMLSLDNAFSRDDLVAWSERVHRDLES
TAPLEYLCELKIDGLAIALLYEKGRLVRAATRGDGRTGEDVTLNVRTIPTIPDVLGGDPA
THPDLIEIRGEVFLPVEAFRALNEAQVAAGKAPFANPRNAAAGSLRQKDPRVTASRPLRM
YAHGIGALTWGQGRGTGIDRQSQVYDLLAGWGVPTSTHTRVVGGLDEVWERVAYFGEHRH
DVEHEIDGIVVKVDDIALQRRLGATSRAPRWAIAYKYPPEEVNTRLVAIEVGIGRTGRAT
PFAVMEPVLVAGSTVRQATLHNQDVVRVKGVRIGDMVVLRKAGDVIPEIVGPAPQAPDDD
VPRVEWQMPADCPECGTPLRPMREGDVDLRCPNAQGCPAQVRGRLEHIGSRGAFDIEVLG
EVTAAALTQPEVPETPPVPNEAYLFDLVGYGPDAPADEVERVRAASLARLAEVEVVVRDA
ETGLPKEDADGTVRRRTPFRRTLKHTRAQRAAAEAEGRELVDWEPSEAARTLLDQLEIAK
TKELWRAIVALSIRNVGPTAARALAQEFGSMRALREVVDPSAQDADVPAPADAVARLAAV
EGVGPTIAQSLLDWFAEPWHREIVDRWEAAGVVMADAADESTPRTLEGVTVVVTGSLERF
SRDGAKEAVLARGGKASGSVSKKTDFVVVGENAGSKEAKARELGLRILDEAGFEALLAGG
PAAVAPADDGS
NT seq
2376 nt
NT seq
+upstream
nt +downstream
nt
atgggacacgtgagcgacgcgacccccgtgaccgacgagcacgacgtgccggccgaggcc
cgccaccggtggacggagctggcggagcaggtgcgcgccgaccagttcgcgtactacgtg
cgcgacgccccgacgtcgtcggacgcggagtacgacgagcggatgcgtgctctcgagcgg
ctggaggaggagcacccgggcctgcggacgccggactcgccgacgcagcgcgtcggcggc
acgttctcgaccgacttcgcggccgtcgagcacgtgcagcgcatgctgtcgctcgacaac
gcgttctcgcgcgacgacctggtggcgtggtccgagcgcgtgcaccgcgacctggagagc
accgcaccgctcgagtacctgtgcgagctgaagatcgacgggctggcgatcgccctgctg
tacgagaagggccgtctggtgcgggcggcgacccgcggggacgggcggacgggggaggac
gtcacgctcaacgtccgcacgatcccgaccatcccggacgtgctggggggtgacccggcg
acgcaccccgacctcatcgagatccgcggcgaggtgttcctgcccgtcgaggcgttccgc
gcgctcaacgaggcgcaggtcgcggcgggcaaggcgcccttcgccaacccgcgcaacgcg
gcggcgggctcgctgcggcagaaggacccgcgcgtgaccgcgtcccggccgctgcggatg
tacgcgcacggcatcggcgcgctcacgtggggccaggggcgcggcacggggatcgaccgg
cagtcccaggtgtacgacctgctggccggctggggcgtccccacgtccacgcacacgcgc
gtggtcggcggactggacgaggtctgggagcgggtcgcgtacttcggtgagcaccggcac
gacgtcgagcacgagatcgacggcatcgtggtcaaggtcgacgacatcgcgctgcagcga
cggctcggcgcgacgagccgggcgccgcggtgggcgatcgcctacaagtacccgccggag
gaggtgaacacccggctcgtggccatcgaggtcggcatcggccggaccgggcgcgccacg
ccgttcgccgtcatggagcccgtcctggtcgccggcagcaccgtgcgccaggcgacgctg
cacaaccaggacgtggtgcgggtcaagggcgtgcgcatcggggacatggtcgtgctgcgc
aaggcgggcgacgtgatccccgagatagtgggtcccgcaccccaggcgccggacgacgac
gtgccccgcgtcgagtggcagatgccggcggactgccccgagtgcgggacgccgctgcgc
cccatgcgcgagggcgacgtggacctgcggtgccccaacgcgcagggctgcccggcccag
gtgcgcggccggctggagcacatcggctcgcgcggcgcgttcgacatcgaggtgctgggc
gaggtcacggcggccgccctgacccagcccgaggtgcccgagacgcccccggtgccgaac
gaggcgtacctgttcgacctggtcgggtacggccccgacgcgcccgccgacgaggtcgag
cgggtgcgcgcggcgagcctcgcgcggctcgcggaggtcgaggtggtcgtccgtgacgcc
gagaccgggctgccgaaggaggacgccgacggcaccgtgcgccggcgcaccccgttccgc
cgcacgctcaagcacacccgggcgcagcgtgccgccgccgaggccgagggacgcgagctc
gtcgactgggagccctcggaggccgcacgcacgctgctcgaccagctcgagatcgcgaag
accaaggagctgtggcgcgcgatcgtcgcgctcagcatccgcaacgtcgggccgaccgcc
gctcgcgcgctcgcgcaggagttcgggtcgatgcgggcactgcgtgaggtcgtggacccg
agcgcccaggacgccgacgtacccgccccggcggacgccgtggcgcgcctcgcggcggtc
gagggcgtcggcccgaccatcgcgcagtccctgctcgactggttcgccgagccgtggcat
cgcgagatcgtcgaccggtgggaggcggcgggcgtcgtcatggcggacgcggccgacgag
tcgacgccgcgcacgctcgagggcgtcaccgtcgtcgtcaccggcagcctcgagcggttc
agccgcgacggtgcgaaggaggcggtgctcgcgcgcggcggcaaggcgtcgggctcggtg
tcgaagaagaccgacttcgtcgtcgtcggggagaacgccgggtccaaggaggccaaggcg
cgcgagctcgggctgcggatcctcgacgaggccgggttcgaggcgctcctcgcgggtggc
ccggcggccgtggcaccggccgacgacggctcgtga
DBGET
integrated database retrieval system
