Conexibacter woesei: Cwoe_1370
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Entry
Cwoe_1370 CDS
T01153
Name
(GenBank) DNA ligase, NAD-dependent
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
cwo
Conexibacter woesei
Pathway
cwo03030
DNA replication
cwo03410
Base excision repair
cwo03420
Nucleotide excision repair
cwo03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cwo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Cwoe_1370
03410 Base excision repair
Cwoe_1370
03420 Nucleotide excision repair
Cwoe_1370
03430 Mismatch repair
Cwoe_1370
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cwo03032
]
Cwoe_1370
03400 DNA repair and recombination proteins [BR:
cwo03400
]
Cwoe_1370
Enzymes [BR:
cwo01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
Cwoe_1370
DNA replication proteins [BR:
cwo03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
Cwoe_1370
DNA repair and recombination proteins [BR:
cwo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
Cwoe_1370
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cwoe_1370
MMR (mismatch excision repair)
DNA ligase
Cwoe_1370
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
Cwoe_1370
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_aden
DNA_ligase_OB
HHH_2
HHH_5
BRCT
Nlig-Ia
DNA_ligase_ZBD
PTCB-BRCT
HHH
Motif
Other DBs
NCBI-ProteinID:
ADB49799
UniProt:
D3EYS5
LinkDB
All DBs
Position
1435255..1437309
Genome browser
AA seq
684 aa
AA seq
DB search
MSAGPDAQRAAVLRRELAYHGHRYYDLDDPEIGDDAYDALLDELRALEAAHPELLTPDSP
TQRVGGAVVSELRKVRHRRRMLSLANARSEQELLAWVERMRAHLAREGIEDPRFEYVVEP
KVDGLAMSLHYENGTLIRGVTRGDGEIGEDVTHNIRTIEQIPQQIDGAPAWLEVRGEVYM
SLADFEALNLRRAEEGRSTFMNPRNSAAGTIRQLDSRLAAERPLSMWCYGIGETEGISFS
THWESLQWLRAHGFPVNDEIRRIRTAEKVVARCERWQERRGSLDFEIDGVVVKVDDVELQ
RRLGVVGRDPRWAIAWKFPPTTAVTQLHDVMWNVGKFGTLHPFAVLEPVHVGGVTVKLAT
LHNEEDLARKDVRPGDDVIVLRAGDVIPQVLSPAPHVAERSDRAPVPRPPARCPVCDTPT
VKGEGVFTKCPNRDCPGRRWQLLQHYVSRGAMDVDGIGEKQVSVLMEHGLLRTPGDYYRL
SAEQLMQLDRFGEVSARNAVEAIAASKERPFGRVLFGLGIEGVGSVTGRSLAQRFRTIDA
LTAASAEEIAATPGIGPIVGRLIHDQLRDEHLRAVIDDLRAHGVRMEEDGPPPGEGPLAD
KAIVLTGTLPTLTREEATERILAAGGRVTSSVSRRTDYVVAGERAGTKLEKAERLRVPVL
DEDGLEALLRGAGDAGAEDDLRNT
NT seq
2055 nt
NT seq
+upstream
nt +downstream
nt
gtgagcgcggggcctgatgcgcagcgcgcagccgtgctgcgcagagagctggcctaccac
ggccaccgctactacgacctcgacgaccccgagatcggcgacgacgcctacgacgcgctg
ctcgacgagctgcgcgcgctcgaggccgctcatcccgagctgctcacgccggactcgccg
acccagcgggtcggcggcgcggtcgtctcggagctgagaaaggtcagacacagacggcgg
atgctgtcgctcgcgaacgcgcgcagcgagcaggagctgctggcgtgggtcgagcggatg
cgcgcccacctcgcgcgcgaggggatcgaggacccgcgcttcgagtacgtcgtcgagccg
aaggtcgacgggctcgcgatgtcgctgcactacgagaacgggacgctgatacgcggcgtc
acgcgcggcgacggcgagatcggcgaggacgtcacgcacaacatccgcacgatcgagcag
atcccgcagcagatcgacggtgccccggcctggctggaggtgcgcggcgaggtctacatg
tcgctggccgacttcgaggcgctcaacctgcgccgcgcggaggagggcagatcgacgttc
atgaacccgcgcaactccgccgcgggcacgatccgccagctcgactcgcgcctcgccgcc
gagcggccgctgtcgatgtggtgctacgggatcggcgagacggaggggatctcgttcagc
acccactgggagagcctgcagtggctcagagcgcacggcttccccgtcaacgacgagatc
agacggatcagaacggccgagaaggtcgtggcacgctgcgagcggtggcaggagcggcgc
ggctcgctcgacttcgagatcgacggcgtcgtcgtgaaggtcgacgacgtcgagctgcag
cggcgcctcggcgtcgtcgggcgcgacccgcgctgggcgatcgcgtggaagttcccgccg
acgacggcggtcacgcagctgcacgacgtgatgtggaacgtcggcaagttcggcacgctg
cacccgttcgcggtgctggagccggtccacgtcggcggcgtcacggtcaagctcgcgacg
ctgcacaacgaggaggacctcgcgcgcaaggacgttcgtcccggcgacgacgtgatcgtg
ctgcgcgccggcgacgtgatcccgcaggtgctctcgccggcgccgcacgtcgccgagcgc
agcgaccgcgcgccggtgccgcgaccgcccgccagatgcccggtctgcgacacgccgacg
gtgaagggggagggcgtcttcacgaaatgcccgaaccgcgactgccccgggcgccgctgg
cagctgctccagcactacgtctcgcgcggggcgatggacgtcgacgggatcggcgagaag
caggtgtcggtgctgatggagcacggcctgctgagaacgcccggcgactactaccgtctg
agcgccgagcagctgatgcagctggaccgcttcggcgaggtgtcggcgagaaacgcggtc
gaggcgatcgccgcctcgaaggagcggccgttcggcagagtgctgttcgggctcgggatc
gagggggtcggctcggtcaccggccgcagcctcgcgcagcggttccgcacgatcgacgcg
ctcacggccgcctctgccgaggagatcgccgcgacgccggggatcggcccgatcgtcggc
cggctgatccacgaccagctgcgcgacgagcatctgcgcgccgtgatcgacgatctgcgc
gcgcacggcgtgcggatggaggaggacggcccgccgcccggcgaaggtccgctcgccgac
aaggcgatcgtgctgaccggcacgctgccgacgctgacgcgcgaggaggcgaccgagcgg
atcctcgccgccggcgggcgcgtgacctcgtcggtgtcgagaagaaccgactacgtcgtc
gcgggcgagagagccggcacgaagctggagaaggctgagcggctgagagtcccggtgctc
gacgaggacgggctggaggcgctgctgcgcggagcgggtgatgcgggtgcggaggacgat
ttgcgcaacacctga
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