Conexibacter woesei: Cwoe_5633
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Entry
Cwoe_5633 CDS
T01153
Name
(GenBank) DNA ligase, NAD-dependent
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
cwo
Conexibacter woesei
Pathway
cwo03030
DNA replication
cwo03410
Base excision repair
cwo03420
Nucleotide excision repair
cwo03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cwo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Cwoe_5633
03410 Base excision repair
Cwoe_5633
03420 Nucleotide excision repair
Cwoe_5633
03430 Mismatch repair
Cwoe_5633
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cwo03032
]
Cwoe_5633
03400 DNA repair and recombination proteins [BR:
cwo03400
]
Cwoe_5633
Enzymes [BR:
cwo01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
Cwoe_5633
DNA replication proteins [BR:
cwo03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
Cwoe_5633
DNA repair and recombination proteins [BR:
cwo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
Cwoe_5633
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cwoe_5633
MMR (mismatch excision repair)
DNA ligase
Cwoe_5633
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
Cwoe_5633
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_aden
DNA_ligase_OB
HHH_2
HHH_5
DNA_ligase_ZBD
BRCT
HHH
PTCB-BRCT
RNA_ligase
zf-tcix
Motif
Other DBs
NCBI-ProteinID:
ADB54037
UniProt:
D3F0V3
LinkDB
All DBs
Position
6032559..6034571
Genome browser
AA seq
670 aa
AA seq
DB search
MTQDPDEQARALAAQIDHHRGLYARGAPALVDADYDALEDELRALLAASPEVVLDDNPLD
RPWAPELVPGQTIRHSRPMLSLEKATTAEQLDAFCARFPGQAFRVTPKLDGISIAIVYQD
GELEYVATRGDGRDGERVTDKARLVVLGLPLTLGAAGRVEVRGEAVMLDSIWRAYNDAHP
DRPLTNPRSAAAGTFVVKSPEACVAEGRTLRFFAFDLDEAEVSDGDVSERLVALGFEVPD
VLPAADAEQARAAIEQVAARRGEYDFGIDGAVVRLASRRAFEAAGATSSAPRGALAWKYP
AEERTTVLRAVTWPVGKIGRVVPRAQVDPVFVGGTTVTFASLHNPRLVRERDIRIGDTVR
IMRRGDVIPFIAGSVVEQRTGDEVEIELPTHCPSCGTELVVRGTGEELWCENLQCPAQAV
RRLIHWSSRHASDMEGVGNTWIEKLAEDGVLERPSDFYALTVEQLVGYERMGEVSANAMV
ASIDRSRGVGLRRALIGLAIPMASEGVAKRLCLAGFERIEEIVERTAEELEAIRDIGPKV
AASMVAYFARPEVQEELCALRAAGVDLDVRDEDRPIEVADAAETPLKGATVVVTGAFADP
DSGAKVARPAVVRLLEQAGATSVSSVSATTTMLIAGSNVGAAKTDKAARLGVQVVDQEQA
WDWLAEAGVR
NT seq
2013 nt
NT seq
+upstream
nt +downstream
nt
gtgacccaggatcccgacgagcaggcgcgggcgctggccgcgcagatcgaccaccaccgc
ggcctctacgcacgtggcgcgccggcgctggtcgacgccgactacgacgcgctggaggac
gagctgcgagcgctgctggcggccagtcccgaggtcgtgctggacgacaacccgctcgac
cggccgtgggcgccggagctggtcccgggccagacgatccgccacagccggccgatgctg
tcgctggagaaggcgacgacggccgagcagctcgacgccttctgcgcgcgcttccccggg
caggcgttccgcgtcacgccgaagctcgacgggatctcgatcgcgatcgtctaccaggac
ggcgagctggagtacgtcgcgacgcgcggcgacggccgcgacggcgagcgcgtgaccgac
aaggcgcggctcgtcgtgctcgggctgccgctcacgctcggcgccgccggccgcgtcgag
gtccgcggcgaggcggtgatgctcgactcgatctggcgggcgtacaacgacgcgcacccc
gacagaccgttgacgaacccgcgcagcgcggcggccggcacgttcgtcgtcaagtcgccg
gaagcgtgcgtcgccgaaggcaggacgctgcgcttcttcgcgttcgacctcgacgaggcg
gaggtctctgacggcgacgtcagcgagcggctcgtcgcgctcggcttcgaggtcccggac
gtgctgcccgccgccgacgccgagcaggcgcgcgcggcgatcgagcaggtcgctgcgcgc
cgcggcgagtacgacttcggcatcgacggcgcggtcgtgcggctcgcctccaggcgcgcg
ttcgaggccgccggcgcgaccagcagcgcgccgcgcggcgcgctcgcgtggaagtacccg
gcggaggagcgcacgaccgtgctgcgcgctgtcacgtggccggtcggcaagatcggccgc
gtcgtgccgcgcgcccaggtcgaccccgtcttcgtcggcggcacgacggtcacgttcgcc
tcgctgcacaacccgcggctcgtgagagagcgcgacatccgcatcggcgacaccgtccgg
atcatgcgccgcggcgacgtgatcccgttcatcgccggctcggtggtcgagcagcggacg
ggcgacgaggtcgagatcgagctgccgacgcactgcccgtcgtgcgggaccgagctggtc
gtgcgcggcaccggcgaggagctgtggtgcgagaacctccagtgcccggcacaggcggtc
cgccgcctgatccactggtcctcgcgccacgcctccgacatggagggcgtcggcaacacg
tggatcgagaagctggccgaggacggcgtgctggagcggccgtcggacttctacgcgctg
acggtcgagcagctggtcggctacgagcggatgggcgaggtgtcggcgaacgcgatggtc
gcctcgatcgaccgttcgcgcggcgtcgggctgcgccgcgcgctgatcgggctggcgatc
ccgatggcgtccgagggcgtcgcgaagcggctctgcctcgccggcttcgagcggatcgag
gagatcgtggagagaacggcggaggagctggaggcgatccgcgacatcggcccgaaggtc
gccgcctcgatggttgcctacttcgcgcggcccgaggtgcaggaggagctgtgtgcgctg
cgcgccgccggcgtcgacctcgacgtgcgcgacgaggaccgcccgatcgaggtcgccgac
gccgccgagacgccgctgaagggcgcgaccgtcgtcgtgaccggcgcgttcgccgatccc
gacagcggcgcgaaggtcgcgcggcccgcggtcgtgcggctgctggagcaagccggcgcg
acgtcggtgtcgtcggtcagcgcgacgacgacgatgctgatcgcgggcagcaacgtcggc
gccgcgaagaccgacaaggccgcgagactcggcgtccaggtcgtcgaccaggagcaggcg
tgggactggctggcggaggccggcgtgcggtga
DBGET
integrated database retrieval system
