Cellulomonas xiejunii: NP048_05725
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Entry
NP048_05725 CDS
T09093
Symbol
ligA
Name
(GenBank) NAD-dependent DNA ligase LigA
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
cxie
Cellulomonas xiejunii
Pathway
cxie03030
DNA replication
cxie03410
Base excision repair
cxie03420
Nucleotide excision repair
cxie03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cxie00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
NP048_05725 (ligA)
03410 Base excision repair
NP048_05725 (ligA)
03420 Nucleotide excision repair
NP048_05725 (ligA)
03430 Mismatch repair
NP048_05725 (ligA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cxie03032
]
NP048_05725 (ligA)
03400 DNA repair and recombination proteins [BR:
cxie03400
]
NP048_05725 (ligA)
Enzymes [BR:
cxie01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
NP048_05725 (ligA)
DNA replication proteins [BR:
cxie03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
NP048_05725 (ligA)
DNA repair and recombination proteins [BR:
cxie03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
NP048_05725 (ligA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NP048_05725 (ligA)
MMR (mismatch excision repair)
DNA ligase
NP048_05725 (ligA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
NP048_05725 (ligA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_aden
DNA_ligase_OB
HHH_2
DNA_ligase_ZBD
BRCT
PTCB-BRCT
HHH_5
zf-TFIIB
Motif
Other DBs
NCBI-ProteinID:
UUI72940
LinkDB
All DBs
Position
1243055..1245490
Genome browser
AA seq
811 aa
AA seq
DB search
MNDVTPVTDGQDVPAEARHRWTQLAEQIRADQFAYYVRDAPSTSDAAYDERMRELERLED
EHPGLRTPDSPTQRVAGTFSTEFTAVDHVQRMLSLDNAFSREDLVAWAERVHRDLDGAGP
VEYLCELKIDGLAIALLYEKGRLVRAATRGDGRTGEDVTLNVRTISTIPDVLAGDPATHP
DLIEIRGEVFLPVEAFGELNEAQVAAGKAPFANPRNAAAGSLRQKDPRVTASRPLRMYAH
GIGALTWGEGRGTGIERQSQVYELLAGWGVPTSSHSRVVTGLDDVWQRIVHFGEHRHDVE
HEIDGVVVKVDDIALQRRLGATSRAPRWAIAYKYPPEEVNTRLLAIELGIGRTGRATPFA
VMEPVLVAGSTVRQATLHNQDVVRVKGVRIGDMVVLRKAGDVIPEIVGPAPQAPDDDVPR
VEWHMPANCPECGTPLRPMREGDVDLRCPNAQGCPAQVRGRLEHIGSRGAFDIEVLGEVT
AAALTQPEVPETPPVPNEAYLFDLVGYAPDAPADEVDRVRSASLARLAEVEVVVRDAETG
LPKEDADGTVRRRTPFRRTLKHTKAQRAAAEADGRSLPEWEPSEAARTLLDQLDLAKTKD
LWRAIVSLSIRNVGPTAARALAQEFGSMAALRAVVDPTAQGEGAELDPVAAVARLAGVEG
VGPTIAQSLLDWFAEPWHREIVDRWAAAGVVMADAVDESTPRTLEGVTVVVTGSLERFSR
DGAKEAILVRGGKASGSVSKKTDFVVVGENAGSKEAKARELGLTILDEEGFEALLAGGPG
AVATPAGEDADERAPEPGTTDEVATGTADDR
NT seq
2436 nt
NT seq
+upstream
nt +downstream
nt
gtgaacgacgtgacccctgtgaccgacgggcaggacgtgccggccgaggcccggcaccgc
tggacgcagctggccgagcagatccgcgcggaccagttcgcctactacgtccgtgacgcc
ccgagcacgtccgacgccgcctacgacgagcggatgcgcgagctcgagcgactggaggac
gagcacccgggcctgcggacgccggactcgcccacgcagcgcgtcgcagggacgttctcc
accgagttcacggccgtcgaccacgtgcagcgcatgctgtcgctcgacaacgcgttctcg
cgcgaggacctggtggcgtgggcggagcgggtccaccgtgacctcgacggcgcgggcccc
gtcgagtacctctgcgagctgaagatcgacgggctcgcgatcgcgctgctgtacgagaag
ggacgcctggtccgcgcggcgacgcggggcgacggccgcacgggtgaggacgtgacgctc
aacgtccgcacgatctcgacgatcccggacgtgctcgcgggcgacccggcgacccacccc
gacctcatcgagatccgcggtgaggtcttcctgccggtcgaggcgttcggagagctgaac
gaggcgcaggtcgccgccgggaaggcgccgttcgccaatccccgcaacgcggccgctggc
tcgctgcgtcagaaggacccgcgcgtcacggcgtcacgcccgctgcggatgtacgcgcac
ggcatcggcgccctgacatggggcgaggggcgcggcacggggatcgagcggcagtcgcag
gtgtacgagctgctggcgggctggggcgtcccgacgtcctcccactctcgggtggtcacc
ggcctcgacgacgtctggcagcgcatcgtccacttcggcgagcaccggcacgacgtcgag
cacgagatcgacggcgtcgtcgtcaaggtcgacgacatcgcgctgcagcgccggctgggc
gcgaccagcagggcgccgcggtgggcgatcgcctacaagtacccgccggaggaggtgaac
acgcgcctgctggccatcgagctcggcatcggccggaccggccgcgcgacgccgttcgcc
gtgatggagcccgtgctcgtggcgggcagcaccgtgcggcaggcgacgttgcacaaccag
gacgtggtccgggtcaagggcgtgcgtatcggcgacatggtggtgctgcgcaaggccggt
gacgtgatcccggagatcgtggggcccgcgccccaggccccggacgacgacgtgccgcgc
gtcgagtggcacatgcccgccaactgccccgagtgcgggacgcccctgcggccgatgcgc
gagggcgacgtcgacctgcggtgccccaacgcgcaggggtgcccggcgcaggtccgcggg
aggctcgagcacatcgggtcccgcggtgccttcgacatcgaggtgctgggcgaggtcacg
gcggccgccctgacgcagccggaggttcccgagacgccgccggtgcccaacgaggcgtac
ctcttcgacctcgtgggctacgccccggacgcgcccgcggacgaggtggaccgggtgcgg
tccgcgagcctcgcgcggctcgcggaggtcgaggtcgtggtccgggacgccgagacgggg
ctgcccaaggaggacgcggacggcaccgtgcgccggcgtacgccgttccgacgcacgctc
aagcacaccaaggcgcagcgggcggccgcggaggcggacggccggtccctgcccgagtgg
gagccctcggaggcggcgcgcaccctcctggaccagctggacctcgcgaagaccaaggac
ctgtggcgggcgatcgtgtcgctgagcatccgcaacgtcgggccgacggccgcccgggcg
ctggcgcaggagttcgggtcgatggccgcgctgcgggcggtggtggacccgacggcccag
ggggagggcgccgagctcgacccggtggccgcggtggcgcggctcgccggggtcgagggg
gtggggccgacgatcgcccagtccctgctcgactggttcgccgagccgtggcaccgcgag
atcgtcgaccgctgggcggcggcgggggtggtcatggcggacgccgtcgacgagtcgacc
ccgcgcacgctggagggcgtgacggtggtcgtcaccgggagcctcgagcgcttcagccgc
gacggcgccaaggaggcgatcctcgtgcggggcggcaaggcctccggctcggtgtcgaag
aagaccgacttcgtggtcgtcggcgagaacgccgggtccaaggaggccaaggcgcgtgag
ctggggctgaccatcctcgacgaggaggggttcgaggcgctgctcgccgggggcccgggg
gcggtcgcgacgcctgcgggcgaggacgccgacgagcgcgcacccgagcccggcacgacg
gacgaggtggcgaccggcaccgcggacgaccggtga
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