Synechococcus sp. JA-2-3B'a(2-13): CYB_1874
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Entry
CYB_1874 CDS
T00319
Symbol
cefD
Name
(GenBank) isopenicillin N-epimerase
KO
K04127
isopenicillin-N epimerase [EC:
5.1.1.17
]
Organism
cyb
Synechococcus sp. JA-2-3B'a(2-13)
Pathway
cyb00311
Penicillin and cephalosporin biosynthesis
cyb01100
Metabolic pathways
cyb01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
cyb00001
]
09100 Metabolism
09110 Biosynthesis of other secondary metabolites
00311 Penicillin and cephalosporin biosynthesis
CYB_1874 (cefD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01008 Polyketide biosynthesis proteins [BR:
cyb01008
]
CYB_1874 (cefD)
Enzymes [BR:
cyb01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.17 isopenicillin-N epimerase
CYB_1874 (cefD)
Polyketide biosynthesis proteins [BR:
cyb01008
]
Nonribosomal peptide tailoring proteins
Others
CYB_1874 (cefD)
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Gene cluster
GFIT
Motif
Pfam:
Aminotran_5
Aminotran_1_2
DegT_DnrJ_EryC1
Cys_Met_Meta_PP
Beta_elim_lyase
Motif
Other DBs
NCBI-ProteinID:
ABD02829
UniProt:
Q2JKG0
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Position
complement(1957778..1958914)
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AA seq
378 aa
AA seq
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MWGLDPQAVFLNHGSYGATPKKVLQAQSVWRERLEAQPVQFMGEELPRALRAAAAELAHF
VGAEPENLVFVENATSGVNAVLRSLRFRPEDQIACTNHGYGAVRQALQYICAQWGAIPVE
AQIPFPIAGPEQVIAAFEAILTPQTRLAVLDHLTSPTALIYPLPELIGLCRERGIPVLVD
GAHAPGVLPLELEKLGADWYTGNAHKWLFAPKGCAFLWVAPYRQAQTHPTVISHGYRQGF
TAEFDWVGTRDPSAWLAISAALAFIQGVGLDNIRQHNHTLLLQARQLLLEALEGIPPAPE
KMLGFMATLPLPPFWQQWIPELPLEERARRLHDYLWYKYRIEVPIIPFAGQLWVRISAQV
YNRLAEYEQLALALQHLP
NT seq
1137 nt
NT seq
+upstream
nt +downstream
nt
ttgtggggactggatccgcaagccgtttttttgaatcacggctcctacggcgcgaccccg
aaaaaggtgttgcaggcccagagtgtatggcgggaacgccttgaggctcagccggtgcag
tttatgggagaggaacttcctcgagccttgcgggcggcggcagcagaactggcccatttc
gtcggggccgaacccgaaaatttggtgtttgtggaaaatgccaccagcggggtcaatgcc
gttttgcgctcgctgcggttccggccagaggatcagatcgcctgcaccaatcacggttac
ggggccgttcgtcaggcattgcagtacatctgtgcccagtggggagccatcccagttgag
gcgcagatccctttccccattgcggggccagagcaggttatcgcggccttcgaggccatc
ctcactccccaaactcgcctggcggtgttggatcacctcacctcgcctacggctctgatc
taccccctgcctgagctgatcggcctctgtcgggagcgcgggatcccggttttggtggat
ggcgcccatgcccccggagttctccccttggagttggaaaagctaggagccgattggtac
accggcaatgcccacaagtggctgtttgccccgaaaggctgtgcctttttgtgggtggcc
ccctatcgacaggcccaaacccatcctacggtgatctcccacggctataggcaagggttc
acagcggagttcgactgggtgggcacacgggatcccagcgcttggttggccatttcagca
gccctggcgtttatccaaggggtgggactggacaatatccgtcagcacaaccacactctg
ctgctgcaggcgcggcagttgctcttggaggctcttgaggggatcccgcccgcccccgaa
aagatgttgggctttatggccaccctacccttgccgccattttggcagcagtggatccct
gagcttcctcttgaggagcgcgcccgtcggcttcacgattacctctggtacaagtaccgc
attgaggttccgatcatccccttcgccgggcagctttgggtacgcatctcggcccaggtc
tacaaccgtttggcagagtacgaacagttggcgctggccttgcagcatctgccctga
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