Cyanobacterium sp. DS4: Dongsha4_04150
Help
Entry
Dongsha4_04150 CDS
T11028
Symbol
shc
Name
(GenBank) squalene--hopene cyclase
KO
K06045
squalene-hopene/tetraprenyl-beta-curcumene cyclase [EC:
5.4.99.17
4.2.1.129
]
Organism
cyd Cyanobacterium sp. DS4
Pathway
cyd00909
Sesquiterpenoid and triterpenoid biosynthesis
cyd01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
cyd00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00909 Sesquiterpenoid and triterpenoid biosynthesis
Dongsha4_04150 (shc)
Enzymes [BR:
cyd01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.129 squalene---hopanol cyclase
Dongsha4_04150 (shc)
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.17 squalene---hopene cyclase
Dongsha4_04150 (shc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SQHop_cyclase_C
SQHop_cyclase_N
TED_complement
Prenyltrans
Motif
Other DBs
NCBI-ProteinID:
WVL01391
LinkDB
All DBs
Position
972492..974414
Genome browser
AA seq
640 aa
AA seq
DB search
MTAQLTNPNKVEHSKVKSGIKQAQDYLFSLQEKDGHWCAYLESNVTLTAEAVLLYKIWGI
DSHKPLHKIEHYLRSQQREHGGWELYYGDGGDLSTSVEAYMALRLLGVAQDDEALIKGKR
FILSKGGISKSRIFTKFHLAIIGCYDWRGVPSIPPWIMLLPQNPIFTIYEMSSWARSSTV
PLLIVFDQKPVFKIEPKINLDELYSEGKENVRYELPRSGDWTDIFVQLDNLFKFAEDINF
VPFKEESIRAAEKWIIEREEVTGDWGGIIPAMLNSLFAFKTLNYHVNDPMVARGLEAVEN
FALETHDDYLVQACVSPVWDTAWCLRALVESGVAPNHPALVKGGEWLLDKQILDYGDWIV
KNPHGKPGGWAFEYENRFYPDMDDSSVVIMTLHQLELPREDLKKEAILRCLRWIETMQCH
NYGWAAFDINNDANWLNLLPYADLKAMIDPATADITARVLEMVGSCDLPMSSSKIQKAIA
FLLHQQENDGSWFGRWGVNYIYGTSGALSALAVIAPQTSQEAMKKGINWLINCQNPDGGW
GETCDSYKNPALKGKGNSTASQTAWALIGLLDAGKALGKFEQDSINKGINYLISSQTETG
TWEEKEFTGTGFPQHFYINYHLYRHYFPLIALGRFENFLI
NT seq
1923 nt
NT seq
+upstream
nt +downstream
nt
atgacagctcaattaacgaatccgaataaagtagaacatagtaaagttaagtctggaatc
aaacaagctcaagattatttattttccctacaagaaaaagatggtcattggtgtgcctat
ctcgaatctaatgtcactctcaccgcagaagcagtattattatataaaatttggggtatt
gactcccataaacctcttcataaaatagaacattatttgcgatcgcaacagagagaacac
ggtggttgggaattatattacggtgatggaggagatttaagcacatcagtagaagcctat
atggcattaagactattgggtgttgcccaagacgatgaagccctaatcaaagggaaaaga
tttatcttaagtaagggtggtattagcaaaagtcgcatctttacaaaatttcacctagca
attattggttgctatgattggcgaggagtgccttctatccctccttggattatgttatta
ccccaaaatcctatttttaccatctatgaaatgtctagttgggcaagaagtagcaccgta
cctttattaatcgtatttgatcaaaaacccgttttcaagatcgaaccaaaaattaatctt
gacgaattatacagcgaaggtaaagaaaatgttagatatgagttgccccgcagtggagat
tggacagatatttttgtacaattagacaacctgtttaaatttgccgaagacatcaatttt
gtacccttcaaagaagaaagtattagggcggcagagaaatggattattgaaagggaagaa
gtaacaggagattgggggggaattattcctgcgatgttaaactctctgtttgccttcaaa
actcttaactatcatgtcaatgaccctatggtagcacggggattggaagcagtagaaaat
tttgcccttgaaacccatgatgattatttagtacaagcctgtgtttctcctgtgtgggat
actgcatggtgtttacgagctttagtagagtcaggagttgccccaaatcatcctgcttta
gttaaagggggagagtggttattagacaaacaaattttagattatggtgattggatagtc
aaaaatcctcacggcaaacccgggggttgggcgtttgagtatgaaaaccgtttttatcct
gatatggatgattcttctgtagtaattatgactcttcaccaactagagttacccagagaa
gacttgaaaaaagaagccattttgcggtgtttgcgttggattgaaaccatgcaatgtcat
aattatggttgggcggcttttgacatcaacaacgatgctaactggttaaatttactaccc
tatgccgatttaaaggcgatgattgatcctgcgacggcggatattactgctagagtatta
gaaatggtgggtagttgtgatttgcccatgtcttctagtaaaattcaaaaagcgatcgca
tttttacttcatcaacaggaaaatgatggtagctggtttggtagatggggagttaactat
atctatggcacatctggagcattatcagcattagctgtcattgcacctcaaaccagtcaa
gaagccatgaaaaaaggtattaattggttaattaactgtcaaaatcctgatggtggttgg
ggtgaaacctgcgacagttataaaaatcctgcattgaaaggtaaaggaaattccaccgcc
tctcaaacggcatgggcattaattggtttacttgatgcaggtaaggctttgggtaaattt
gaacaggatagtattaataaaggaattaattatttaatatcttctcaaacagaaacaggc
acatgggaggaaaaagaatttactggtactggattccctcaacatttttatatcaactat
catttatatcgtcattattttcctctaattgcattaggaagatttgaaaatttcttaatc
taa
DBGET
integrated database retrieval system
