Cyanobium sp. NIES-981: CBM981_1508
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Entry
CBM981_1508 CDS
T04888
Symbol
nth
Name
(GenBank) DNA glycosylase and apyrimidinic (AP) lyase (endonuclease III)
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
cyi
Cyanobium sp. NIES-981
Pathway
cyi03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
cyi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
CBM981_1508 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cyi03400
]
CBM981_1508 (nth)
Enzymes [BR:
cyi01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
CBM981_1508 (nth)
DNA repair and recombination proteins [BR:
cyi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
CBM981_1508 (nth)
Prokaryotic type
CBM981_1508 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
Motif
Other DBs
NCBI-ProteinID:
SBO43219
UniProt:
A0A182AP68
LinkDB
All DBs
Position
I:1367254..1367937
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AA seq
227 aa
AA seq
DB search
MPRLPTARQRAPVILERLGTLYPEATCSLDWRTPYELLIATMLSAQCTDERVNRITPALF
ERFPDAAAAAAVEPAEVEPYVRSAGFFRNKARNIVAASRLLLERHGGEVPQTMEELLQLP
GVARKTASVVLAWCFGINAGVTVDTHVSRLAQRLRLSRHGEPRRIEPDLMKLVPREQWQT
LSIRLIFHGRAVCAARKPLCAACGLADLCPSAPAPAAREKVAGRAAG
NT seq
684 nt
NT seq
+upstream
nt +downstream
nt
atgccccgcctgcccacggcccgccagcgggcgccggtgatcctcgaacggctcgggacc
ctctaccccgaggccacctgctcgctcgactggcgcacgccctacgagctgctgatcgcc
accatgctctcggcccagtgcaccgacgagcgggtgaaccggatcacgccggccctgttc
gagcgcttccccgatgccgccgcggccgccgccgtggagccggccgaggtggagccctat
gtgaggtcggccggcttcttccgcaacaaggccaggaacatcgtggccgcctcccggctg
ctgctggagcgccacggcggtgaggtgccccagaccatggaggagctgctgcagctgccc
ggcgtggcccgcaagaccgcctcggtggtgctggcctggtgcttcggcatcaatgccggc
gtcacggtggacacccacgtgagccgcctggcccagcgcctgcggctcagccgccacggc
gagccgcgccgcatcgaacctgacctgatgaagctggtgccccgggagcagtggcagacc
ctctcgatccggctgatcttccacggccgtgccgtgtgcgccgcccgcaagcccctctgc
gccgcctgcggcctcgccgacctctgccccagcgcgccagctccagccgcgagggagaag
gtggcggggcgggccgcagggtag
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