Cyanobacterium sp. HL-69: AA637_06720
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Entry
AA637_06720 CDS
T05309
Symbol
ligA
Name
(GenBank) DNA ligase (NAD+) LigA
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
cyl
Cyanobacterium sp. HL-69
Pathway
cyl03030
DNA replication
cyl03410
Base excision repair
cyl03420
Nucleotide excision repair
cyl03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cyl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AA637_06720 (ligA)
03410 Base excision repair
AA637_06720 (ligA)
03420 Nucleotide excision repair
AA637_06720 (ligA)
03430 Mismatch repair
AA637_06720 (ligA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cyl03032
]
AA637_06720 (ligA)
03400 DNA repair and recombination proteins [BR:
cyl03400
]
AA637_06720 (ligA)
Enzymes [BR:
cyl01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
AA637_06720 (ligA)
DNA replication proteins [BR:
cyl03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
AA637_06720 (ligA)
DNA repair and recombination proteins [BR:
cyl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
AA637_06720 (ligA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
AA637_06720 (ligA)
MMR (mismatch excision repair)
DNA ligase
AA637_06720 (ligA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
AA637_06720 (ligA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_ligase_aden
OB_DNA_ligase
Nlig-Ia
HHH_2
BRCT
HHH_5
DNA_ligase_ZBD
PTCB-BRCT
BRCT_2
HHH
Ribosomal_S13
Motif
Other DBs
NCBI-ProteinID:
AUC60861
LinkDB
All DBs
Position
1407910..1409934
Genome browser
AA seq
674 aa
AA seq
DB search
MASIPTEISNRVQQLKVKLQEASYAYYVLDNPIMEDSVYDQLYRELQTLEIDYPQLITID
SPTQRIGDKLDGQFNSVKHNIPLYSLDNAFNFEELKQWENRWQKQLSETVDFDYICELKI
DGSAIALTYENGVLTRGLTRGDGITGEDITHNLRTIRSIPLRLNLDNPPHILEVRGEALL
PLKEFERINQERDKNQENLFANPRNATAGTLRQLDPNIVSQRKLQFFAYNLHINSENISI
NSQKESLDFLQQNGFLVNPNHQVCSTLEDVINYCNYWENNRQQLPYMTDGIVIKINSLNL
QNQLGFTQKFPRWAIALKYPADETPTMVEKITVNVGRTGAVTPMAIMKPVLLAGTTVQRA
TLHNYDFLQQLDIRVGDTVVIRKAGEIIPEVVRVIPELRPENTQPFEFPTHCPECASELV
RPENEAVTRCLNNSCPAILRGSLIHWASRGAMDIRGLGEKVVALLMEHKLIKSIADIYEL
KAFQIAELERMGEKSAQNLIMGIEDSKKQPFAKVLYGLGIRYVGAVNAQILADNFPDIDS
LANASIMDLEAINGIGKEIANSVVEWFSIEQNKQLINLLKGHNLTLQNQNSDTQKDEKQL
ILEGKVFVITGTLNQLTRNEAKDLIQKYGGKVTGSVSSKTDYLLAGEKAGSKLTKAQELG
IKIISESELLTIIN
NT seq
2025 nt
NT seq
+upstream
nt +downstream
nt
atggcttctattcccactgaaattagtaatcgagttcaacagttaaaagttaaattgcaa
gaagcaagttatgcttattatgtgttggataatcctattatggaagattcagtttatgat
caactttatcgggaattacaaaccctagaaatagattatccccaattaattactatagat
agtcccactcaaagaataggagataaattagatggtcagtttaattctgttaagcataat
attcctctttatagtttggataatgcttttaacttcgaggagttaaaacagtgggaaaat
agatggcaaaaacagttatctgaaaccgttgattttgattatatttgtgagctaaaaata
gatggcagtgcgatcgcccttacctatgaaaatggagtattaactagggggttaacaagg
ggagatggcattacaggggaagacattacccataatttacgcaccattcgatccattccc
ttaaggttaaatttagataatccaccccacatattagaagtaaggggagaagccctacta
ccccttaaagaatttgaaagaatcaatcaagaaagggataaaaaccaagaaaatttattt
gccaatcctcgcaatgccaccgcaggaacattaagacaattagatcctaatattgttagt
caaagaaaactacaattttttgcttataatttacatataaatagcgaaaatatttctatt
aatagtcaaaaagaatcactagattttttacaacaaaatggctttttagtcaatcctaat
catcaagtttgttcaactttagaagacgtaattaattattgcaattactgggaaaataat
cgtcaacaattaccctatatgactgatggtattgttattaaaataaactccctaaatctt
caaaatcaactcggttttactcaaaaattcccccgatgggcgatcgcccttaaataccct
gccgacgaaacccccaccatggttgaaaaaatcaccgtcaacgtaggacgcactggggca
gtgactcccatggcaataatgaaacccgtgctattagcaggaacaaccgttcaaagagcc
actttacataactacgactttttgcaacaattagacattagagtgggagataccgtggta
attcgcaaagcaggggaaataatccccgaagtcgtcagagttattcccgaattacgcccc
gaaaatactcaacccttcgagtttcccacccattgccccgaatgtgcttcagaattagta
cgcccagaaaacgaagccgttacccgttgcctaaacaactcctgccctgctattttgcgg
ggtagcctaatccattgggcatcccgtggcgccatggacattcgagggttaggagaaaaa
gtagtcgctttgttaatggaacataaattaattaaatccattgccgatatatacgaatta
aaagcctttcaaattgccgaattagagcggatgggcgaaaagtctgcccaaaatttaatc
atgggtattgaagatagtaaaaaacaaccttttgccaaagttttatacggtttaggaatc
cgttatgtaggtgctgtaaatgctcaaattttagcggataattttccagatatagacagt
ttagccaatgccagtattatggatttggaagcaatcaatggcataggaaaagaaattgct
aattctgtagtggaatggtttagcatcgaacaaaataaacaactaattaatcttttaaaa
ggtcacaatctcacattacaaaaccaaaatagtgatactcaaaaagatgaaaaacaacta
atactagaagggaaagtatttgtgattacaggaacattaaaccaattaaccagaaatgaa
gcgaaagatttaattcaaaaatatggaggaaaagtaacaggctcggtaagtagtaaaaca
gactatttattggcaggagaaaaagcaggttcaaagttaactaaagctcaagaattaggc
attaaaattatttctgaatcagaattattaaccataattaattaa
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integrated database retrieval system
