Cyanothece sp. PCC 7425: Cyan7425_0676
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Entry
Cyan7425_0676 CDS
T00836
Name
(GenBank) DNA ligase, NAD-dependent
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
cyn
Cyanothece sp. PCC 7425
Pathway
cyn03030
DNA replication
cyn03410
Base excision repair
cyn03420
Nucleotide excision repair
cyn03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cyn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Cyan7425_0676
03410 Base excision repair
Cyan7425_0676
03420 Nucleotide excision repair
Cyan7425_0676
03430 Mismatch repair
Cyan7425_0676
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cyn03032
]
Cyan7425_0676
03400 DNA repair and recombination proteins [BR:
cyn03400
]
Cyan7425_0676
Enzymes [BR:
cyn01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
Cyan7425_0676
DNA replication proteins [BR:
cyn03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
Cyan7425_0676
DNA repair and recombination proteins [BR:
cyn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
Cyan7425_0676
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cyan7425_0676
MMR (mismatch excision repair)
DNA ligase
Cyan7425_0676
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
Cyan7425_0676
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_ligase_aden
OB_DNA_ligase
HHH_2
Nlig-Ia
HHH_5
BRCT
DNA_ligase_ZBD
HHH
PTCB-BRCT
HHH_3
BRCT_2
Motif
Other DBs
NCBI-ProteinID:
ACL43064
UniProt:
B8HV17
LinkDB
All DBs
Position
477467..479683
Genome browser
AA seq
738 aa
AA seq
DB search
MSNLEHEAERVEMAAATTEIRQRVLELRQLVQRASYAYYVLDAPILEDVVYDQLYRELQD
LETQYPELLTPDSPTQRVGEQPATQFVSVQHRIPLYSLENAFAVADMQAWQDRWQRQGQA
IGEQSATLRSPEYVCELKIDGSALALTYENGVLVRGATRGDGVYGEDITANVRTIRSIPL
RLDWPDPPPIVEVRGEAFLPLDVFHRLNQEREQAGESLFANPRNAAAGTLRQLDARIVAK
RRLDFFAYTLHLPLASARSATQPAAAQQLDLLAVAQSDPAVAAQQLDLSSASQAESVTTH
LPQTQWQSLELLQQIGFRVNPHRQLCPTLADVRQYYDHWNHGRLDLPYMTDGVVVKLNSL
RLQEHLGFTQKFPRWAIAWKYEPEQAVTEVLNISVNVGRTGALTPVAELRPVQLAGTTVS
RATLHNRDRLAELDLHIGDKVVIHKAGEIIPEILQVFPELRPADARPYQLPTHCPECGQP
VVQPVDEAVTRCLNVSCPAIVRGAIVHWVGRDAMDIDGVGEKLVRQLVDRGLVNSVADLY
RLTVAQLLTLERMGNKLAEKVVAAIAKSQSRPWSRVLYGLGIRHVGSVNAQVLTTAFPSV
ERLMAASAEDIEAVHGIGPEIAQSIVQWFQTPANHSLIEQLSAAGVQLAQDTVAVPPSQL
PQPLAGKTFVLTGTLPTLSRDEARSMIGQAGGKVTDSVSKKTDFLVVGADAGSKLDKAGQ
LGIPCLSESQLLELLEET
NT seq
2217 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaccttgaacacgaagctgaaagggtagagatggcagcggcaacaacggaaatc
agacaacgggtgctggaattgcgccaactggtgcagcgagctagctatgcctactacgtg
ctggatgctcccattctggaagatgtcgtttacgatcagctctaccgggaattacaagac
ctggaaactcagtatccggaactgctcacacccgatagtccgactcagcgagtgggggag
caacccgccacccagtttgtctccgttcaacaccgcattcccctctacagtctggaaaat
gctttcgcggtggcagatatgcaggcctggcaggatcggtggcaacggcaggggcaggcc
atcggtgaacaaagcgccactttacggtcaccagaatacgtctgtgagttaaaaattgat
gggtctgccctggccctgacctacgagaatggggtactggtgaggggggcaacgcgagga
gatggggtttacggcgaagatattactgccaatgtgcggacgattcgctccattccgctg
cggttggactggcccgatcctcctccaattgtggaagtgcggggtgaagcgtttttaccc
ctggatgtttttcaccgcttaaatcaagagcgtgagcaggcgggagaaagtttatttgcc
aatccccgcaatgccgcggccggaactctgcgccaactagatgcccggattgtggctaaa
cgacggttagatttttttgcctatactctgcaccttcccctggcctctgcccgttctgct
actcaacccgctgctgctcaacaattagatttattagcggtagctcagtccgatccggcg
gtggcggctcaacagttagatctttcatccgccagtcaggctgagtcagtcacgactcat
ttgccccaaacccaatggcaaagtctggagttattgcaacagattgggtttcgggttaat
ccccatcgccaactttgtcccactctggcggatgtgcgccaatactatgaccactggaat
cacggccgcctcgatctgccctatatgaccgatggcgtggtggtcaaactgaatagtcta
cggctgcaggaacatctgggttttacccaaaagtttccccgctgggcgatcgcctggaaa
tatgaaccggaacaagccgtcaccgaggtgctgaatattagtgtgaatgtggggcgaaca
ggagccttaaccccggtggctgaactccgtcccgtccaacttgcgggtacaacggtgtct
cgagctaccctgcacaaccgcgatcgcctggctgaactggatctgcacattggcgataaa
gtggtcatccacaaggccggagaaattattcctgaaattctgcaggtctttcccgaactg
cgtcctgccgatgcccgtccctatcaactgcccacccattgtccagagtgcggtcaacct
gtggtgcagcctgtggatgaagccgttacccgttgtcttaatgtctcctgtccggcgatc
gtgcggggggcgatcgtccattgggtggggcgggatgccatggatattgatggagtagga
gaaaaactggtgcggcagttagtggatcgcggtctggtaaactcggtcgcagatctttac
cggctgacggtggcccaattgttaaccctggagcggatggggaacaagctggcggaaaaa
gtggtggcggcgatcgccaagtcccagtcacgaccatggtcaagggtcctctacggtttg
ggaattcgccatgtggggagtgtcaatgcccaggtcttaaccacggccttccccagtgtt
gagcggctcatggctgcctcagcggaggatattgaagccgtgcatggcattggtccagaa
attgcccagtcaattgtgcaatggtttcaaacccctgccaaccatagcctgattgagcag
ttgagtgccgctggtgtgcagttagcccaggacacggttgctgttccccccagccagctc
ccccaaccccttgcgggtaaaacctttgtcctgacgggcaccctgcctaccctgagtcgg
gatgaagccaggtccatgattgggcaagccggagggaaggtaaccgattctgtcagcaaa
aaaactgattttttagtggtgggagcagacgctggttctaaactagacaaagccggacag
ttggggattccttgcttgagcgagtcccagttacttgaattactggaagaaacatga
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