Citrobacter youngae: CD187_20100
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Entry
CD187_20100 CDS
T05526
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
cyo
Citrobacter youngae
Pathway
cyo00300
Lysine biosynthesis
cyo00550
Peptidoglycan biosynthesis
cyo01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
cyo00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
CD187_20100
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
CD187_20100
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
cyo01011
]
CD187_20100
Enzymes [BR:
cyo01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
CD187_20100
Peptidoglycan biosynthesis and degradation proteins [BR:
cyo01011
]
Precursor biosynthesis
Amino acid ligase
CD187_20100
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
Motif
Other DBs
NCBI-ProteinID:
AWV28373
LinkDB
All DBs
Position
complement(4094968..4096455)
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AA seq
495 aa
AA seq
DB search
MADRNLRDLLAPWVPGAPERALREMTLDSRVAASGDLFVAVLGHQADGRRYIPQAIAQGV
AAIIAEAKDEATDGEIREMHGVPVIYLSQLNERLSALAGRFYHEPSEKMRLVGVTGTNGK
TTTTQLLAQWSQLLGETSAVMGTVGNGLLGKVIPTENTTGSAVDVQHVLAGLAAQGATVG
AMEVSSHGLVQHRVAALKFAASVFTNLSRDHLDYHGDMEHYEAAKWLLYSTHHCGQAIVN
ADDEVGRRWLAKLPDAVAVSMEDHINPNCHGRWLKAVDVKYHDSGATIRFTSSWGDGEIE
SRLMGAFNVSNLLLALATLLALGYPLADLLKTATQLQPVCGRMEVFSAPGKTTVVVDYAH
TPDALEKALQAARLHCTGKLWCVFGCGGDRDKGKRPLMGAIAEQFADVVVVTDDNPRTEE
PRAIINDILAGMLDAGQAKVMEGRAEAVTNAIMQAKENDVVLVAGKGHEDYQIVGSQRLD
YSDRVTAARLLGVIA
NT seq
1488 nt
NT seq
+upstream
nt +downstream
nt
gtggcagatcgtaatttgcgcgaccttcttgctccatgggtgccgggtgcaccggagcga
gcactgcgggagatgacgcttgacagccgtgtggctgcatcaggcgatctctttgtcgca
gtattgggtcatcaggcggacgggcgtcggtatatcccgcaggcgatagcgcaaggtgtg
gctgccattattgcagaagcaaaagatgaagctactgatggtgaaatccgtgaaatgcat
ggcgttccggtcatctatctcagtcagcttaacgaacgtttatctgcactggcgggccgt
ttttaccacgagccttctgagaaaatgcgtctggtcggcgtaaccgggactaacggtaaa
accaccaccacccaattgctggcccagtggagccaactgcttggcgaaaccagcgcggta
atgggaacagtaggcaatggcctgctgggcaaagtgatcccgacggaaaataccaccggt
tcagccgttgatgtccagcatgtgctggcggggctggctgcgcagggcgcaacggttggc
gcgatggaagtctcttcacatggcctggttcagcatcgcgtggcggcgctgaagtttgcc
gcatcagtatttactaacttaagccgcgaccatctcgactaccacggcgacatggaacat
tacgaagccgcgaaatggctgctgtattccacgcaccattgcggtcaggccatcgtcaat
gcggatgatgaagtcggtcgtcgctggctggcgaaactccctgatgcggttgccgtttcg
atggaagaccacatcaacccgaactgtcatggtcgttggttaaaagcggttgacgtgaag
tatcacgacagtggggcaacgattcgttttacctcctcatggggcgacggcgaaattgaa
agccgcctgatgggggcgtttaacgtcagcaatcttttgctggcgctggcaacgctgttg
gcactgggctatccgttagctgatttactgaaaacggcgacacaattgcagccggtttgc
ggacgtatggaagtgttcagcgcgccgggtaaaaccaccgtggtggttgattacgctcat
acgccagatgcgctggaaaaagcgctgcaggcggcacgtctgcactgtactggcaaactg
tggtgcgtctttggctgcggcggcgatcgcgataaaggcaaacgtccgttgatgggcgca
atcgccgagcagtttgcagatgttgtcgtggtgactgatgacaacccgcgtaccgaagag
ccgcgcgccattattaacgacattctggcgggtatgctggatgccggacaggcgaaggtg
atggaagggcgcgcagaagccgtgacaaacgccattatgcaggcgaaagaaaacgacgtg
gtgctggtggccgggaaaggtcacgaagattaccagatcgtcggctcgcagcgtctcgac
tattctgaccgcgtgaccgcagcgcgtctgctgggggttatcgcatga
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