Cysteiniphilum sp. QT6929: NYP54_03955
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Entry
NYP54_03955 CDS
T09052
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
cys
Cysteiniphilum sp. QT6929
Pathway
cys01501
beta-Lactam resistance
cys01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
cys00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
NYP54_03955
01503 Cationic antimicrobial peptide (CAMP) resistance
NYP54_03955
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cys03036
]
NYP54_03955
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cys02000
]
NYP54_03955
01504 Antimicrobial resistance genes [BR:
cys01504
]
NYP54_03955
Chromosome and associated proteins [BR:
cys03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
NYP54_03955
Transporters [BR:
cys02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
NYP54_03955
Antimicrobial resistance genes [BR:
cys01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
NYP54_03955
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BSH_RND
Beta-barrel_RND_2
BSH_CzcB
HH_MFP_RND
RND-MFP_C
YknX_C
HH_CzcB
Biotin_lipoyl
Beta-barrel_RND
HH_EMRA
BSH_YknX
BSH_CusB
HH_YBHG
PTS_EIIA_1
YqfD
BSH_LcnD
Beta-barrel_YknX
Motif
Other DBs
NCBI-ProteinID:
WHN66392
LinkDB
All DBs
Position
937855..939060
Genome browser
AA seq
401 aa
AA seq
DB search
MAELSLKAPKKKLIKAFIIVIAILVVIFGGIFGFASFVNGKKASAMATWKMQAPEVTATD
AKSETWYPSVKTIGEAVAIQNVNVTAQASGLVSTISFESGQMVKKGDVLFTLDTQQLQAQ
LKQAQADLELARITYQRDADLLKQQAVSQQTADQSKAQYDANLANVESIQADINYRTVKA
PFDGKIGLRQISLGQYFSAGNSAATLTEISPIYIDFSIPQNNFSNVKVGGDIEFTSDSYP
GVTFKAKITAINSQITSDNRALNIQATFDNKDQQHLIYPGMFLDVSLILPPIPNTIIIPR
NAVSYTLYGETVYVLVPDFKDGQPLMSEYSAMKDGQVQLVSTGKQQYTAKQVPVKTTMTN
DNKVIVEGIKAGDMVATSGQNKLQNGVSVVINNDVDFKNNP
NT seq
1206 nt
NT seq
+upstream
nt +downstream
nt
atggctgaactctccctaaaagcacctaagaaaaagcttattaaagcttttatcatcgtc
attgccattcttgtcgttatctttggcggcatctttggctttgccagttttgtcaacggt
aaaaaggcttcagccatggcaacttggaaaatgcaagcacctgaagtcactgctactgat
gctaaatctgaaacgtggtacccaagtgttaaaaccattggtgaagctgtcgccatccaa
aatgtcaatgttaccgctcaagcttcaggcttggtatcaaccatctcgtttgaatccgga
caaatggttaaaaaaggtgatgtgttattcacacttgatacgcaacagttacaagcacaa
ctaaagcaagctcaagctgatttggaacttgctagaatcacctaccaacgtgatgctgat
cttttaaaacagcaagccgtctcacaacaaacggcagatcaatcaaaggcacaatatgat
gccaatcttgccaatgttgaatcgattcaagctgatatcaactatcgcacggtaaaagca
ccatttgatggtaagattggtttgcgtcaaattagcctaggtcaatacttcagtgctggc
aacagtgcagcaacgctaactgaaatatcaccgatttacatagattttagtattccacaa
aataactttagcaatgttaaagttggcggtgacattgagtttacttctgactcctatcca
ggtgttactttcaaggcaaaaatcactgccattaactcacaaatcaccagtgataacaga
gctcttaatattcaagcaacctttgataacaaggatcaacaacatttgatctaccctggt
atgttccttgatgtcagtttaattcttcctccgattccaaacaccatcattatcccgcgc
aatgccgtaagctataccctatatggtgaaacagtttatgtgcttgtgcctgattttaaa
gacgggcaaccattgatgtctgaatacagcgctatgaaagatggacaggttcagctcgtt
tcaacaggtaaacagcaatacacagctaagcaggttccagtgaaaacgactatgactaat
gacaataaagtcatcgttgaaggtattaaagctggtgacatggtggcgacctctggtcaa
aacaaactgcaaaatggtgttagtgttgttatcaataatgacgttgacttcaaaaacaac
ccatag
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