Candidatus Atelocyanobacterium thalassa: UCYN_09020
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Entry
UCYN_09020 CDS
T01159
Name
(GenBank) RND family efflux transporter, MFP subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
cyu
Candidatus Atelocyanobacterium thalassa
Pathway
cyu01501
beta-Lactam resistance
cyu01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
cyu00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
UCYN_09020
01503 Cationic antimicrobial peptide (CAMP) resistance
UCYN_09020
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cyu03036
]
UCYN_09020
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cyu02000
]
UCYN_09020
01504 Antimicrobial resistance genes [BR:
cyu01504
]
UCYN_09020
Chromosome and associated proteins [BR:
cyu03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
UCYN_09020
Transporters [BR:
cyu02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
UCYN_09020
Antimicrobial resistance genes [BR:
cyu01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
UCYN_09020
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HlyD_D23
HlyD_3
Biotin_lipoyl_2
HlyD_2
Biotin_lipoyl
PTS_EIIA_1
SHOCT
KxDL
Motif
Other DBs
NCBI-ProteinID:
ADB95586
UniProt:
D3EQ36
LinkDB
All DBs
Position
1034457..1035827
Genome browser
AA seq
456 aa
AA seq
DB search
MSNNIIGKSSPDDIKIIVLKPKIVKIFSEFTGTIEAKNILILKSEIYGKIKQILAKEGDN
ITKNQIIMEFDPDNLQAKLLESQAKLASTKARLLELETGNRIEDLKEAKARLRGAKVRLN
NTKIGDSIEEIAQARANLNSSQASLELAQQRVARYKMLKEQGVISIDEYQEHITILRRAR
ADLEQTKRRLSQLKKRRLADLDELTTVVETELQNLQRLQAGPRREVIAQAKADVIEASAQ
LQTSQIHISKTKVKAPFSGVVENIFTRDNEYVKEGDSLISLINNNTLRLRLTIPLKYSSR
LSIGLPVEIIDDSEKIITTGKISFISSNIIKNSQSIFIRASFNNLNQKLLNGQFVRARII
WQKNSSLSIPAKSVYHIGKEKFVFIVKDNNSGENNIPNSIAKRVKVQLNSLEGGDYKVIN
GLTAYDKLIVSNNKKLKDGMFLQKLDSHEKKVKNSN
NT seq
1371 nt
NT seq
+upstream
nt +downstream
nt
ttgtcaaataatattatagggaaaagctctcctgatgatataaaaataattgttttaaaa
ccaaaaatagttaaaattttttctgaatttacaggaaccatagaagccaaaaatatatta
atcctcaaatcagaaatttatgggaaaataaaacaaattttagctaaggaaggagacaac
atcacaaaaaatcaaataataatggaatttgatcccgataatttgcaagcaaaattatta
gaatcacaggctaagctagctagtaccaaagctagattattggaattagaaactggaaat
cgtattgaagatctgaaagaagccaaggctagattaagaggtgcaaaagttcgtttaaac
aacacaaaaataggagatagtattgaagagattgctcaagctagagcaaatttaaattct
tcacaggctagtctcgaattagcccagcaaagagttgctcgctataaaatgctaaaagaa
caaggtgtaatttctattgatgaatatcaagaacacataacaattctacgtagagcaaga
gctgatctagaacaaactaaacgacgtttgtcccaactcaagaaaagacgtttagctgat
ttagatgaattgactaccgttgtagaaacagagttacaaaatttacaaagactacaagct
ggtccacggcgagaagttattgctcaagctaaagcagatgttatagaagcaagtgcacaa
cttcaaacatctcaaattcatatttctaagactaaagttaaggcacctttctctggagta
gtagaaaatatttttactagagataatgaatatgtaaaagaaggagattctttaataagt
ttaataaacaacaatactttaagactgcgcttaactattccattaaaatacagttctcga
ctaagtataggtttacctgtagaaattattgatgattcggaaaaaataattactacagga
aaaattagttttatatcttctaatattattaaaaactcacaatcaatattcattagagct
agttttaacaatttaaatcaaaaacttttaaacggtcaatttgttcgtgcaagaataatt
tggcagaaaaatagcagcttatcaattccagctaaatctgtatatcatattggaaaagaa
aaatttgtttttatagttaaagataataattcaggggaaaataacatacctaactcaata
gccaagagagttaaagttcaattaaatagtttagaaggtggtgattataaggtaattaat
ggtttaactgcttatgacaagttgatagtatccaacaataaaaaattaaaagatggaatg
tttcttcaaaaactagattcccatgagaagaaggttaaaaatagtaattaa
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