KEGG   Frigidibacter mobilis: AKL17_1960
Entry
AKL17_1960        CDS       T04387                                 
Name
(GenBank) DNA ligase
  KO
K01972  DNA ligase (NAD+) [EC:6.5.1.2]
Organism
daa  Frigidibacter mobilis
Pathway
daa03030  DNA replication
daa03410  Base excision repair
daa03420  Nucleotide excision repair
daa03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:daa00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    AKL17_1960
   03410 Base excision repair
    AKL17_1960
   03420 Nucleotide excision repair
    AKL17_1960
   03430 Mismatch repair
    AKL17_1960
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:daa03032]
    AKL17_1960
   03400 DNA repair and recombination proteins [BR:daa03400]
    AKL17_1960
Enzymes [BR:daa01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.2  DNA ligase (NAD+)
     AKL17_1960
DNA replication proteins [BR:daa03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     AKL17_1960
DNA repair and recombination proteins [BR:daa03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA ligase
     AKL17_1960
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     AKL17_1960
   MMR (mismatch excision repair)
    DNA ligase
     AKL17_1960
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     RecET pathway
      AKL17_1960
SSDB
Motif
Pfam: DNA_ligase_aden OB_DNA_ligase HHH_2 BRCT DNA_ligase_ZBD PTCB-BRCT
Other DBs
NCBI-ProteinID: AMY69209
UniProt: A0A165SLM0
LinkDB
Position
complement(1940994..1943150)
AA seq 718 aa
MAADLAELAVGEMAPEQAAAEWQRLAEAVTRANRAYHTEDAPEITDAAYDALKRRLAEIE
ARFPSLAAGSPTQEVGAPLAEGFAKVRHEIRMLSLENAFSEDDVTEFDARIRRYLGLGPD
APLLFTAEPKIDGLSLSLRYERGRLVQAATRGDGEMGENVTANAATISDIPQTLTGAPDL
LEVRGEVYMSHADFAALNARQAEAGAKTFANPRNAAAGSLRQLDAAITAARPLRFFAYSW
GALSEPLAATQLGAIRRLAELGFSTNPLTVLCDGPAALVAQYRSIEAERASLGYDIDGVV
YKVDDLALQARLGFRSTTPRWAIAHKFAAELAWTRLEAIDIQVGRTGALSPVARLVPVTV
GGVVVSNATLHNEDYIAGRGADGQPIRGGRDIRIGDWVQVYRAGDVIPKIADIDLARRPA
DAQPYVFPTRCPECGSDALREEGDSVRRCTGGMACPAQAVEKLKHFVSRAAFDIEGLGAR
QIEAFFQDDLLPIRAPADIFTLEARDATNPLQKLKNRDGWGERSASNLFRAIDEKRTIPL
NRLIFALGIRHVGETGASLLAAHYGTWAAFEAAMTAADPAAGDPEKPRGNAEWQDLIAID
GVGPVLAASVVTSFHQPAERGAINELAAHLDVQPVIRRVVTDSPVAGKIVVFTGTLERMT
RAEAKARAEALGAKVAGSVSARTDILVAGPGAGSKASKAADLGVQVIDEDAWLALIGG
NT seq 2157 nt   +upstreamnt  +downstreamnt
atggcggcggatctggcggaacttgcggtcggcgagatggcccccgaacaggcggcagcc
gaatggcagcgcctggccgaggccgtcacccgcgcgaatcgcgcctaccataccgaggac
gcgcctgagatcaccgatgccgcctatgacgcgctgaaacgccgcctggccgagatcgag
gcccgcttcccctcccttgccgccggcagccccacgcaagaggtgggcgcgccgctggcc
gaaggcttcgccaaggtccggcacgagatccggatgctgagccttgaaaatgcgttttcc
gaagatgatgtgacggaattcgatgcgcgcatccgccgctacctcggtcttggccccgat
gcgccgctgctcttcaccgccgagcccaagatcgacggcctttcgctctccttgcgctat
gagcgcggcaggctggtgcaggccgccacccgcggcgatggcgagatgggcgagaatgtc
accgccaatgccgccaccatttcggacatcccgcaaaccctgaccggcgcgcccgatctg
ctggaggtccgcggcgaggtctacatgtcccatgccgatttcgccgcgctcaacgcccgg
caggccgaggccggcgcgaaaaccttcgccaatccgcgcaatgccgccgccggcagcctg
cgccagctcgatgccgccatcaccgccgcccggccgctgcgcttcttcgcctattcctgg
ggcgcgctgtcggaacccttggccgccacccagcttggtgccatccgccgccttgccgaa
ctcggcttcagcaccaacccgctgaccgtgctctgcgatggccccgccgcgctggttgcc
caataccgcagcatcgaggcggagcgcgccagcctcggctatgacatcgacggcgtcgtc
tacaaggtcgacgaccttgccctgcaggcccggctcggcttccgttccaccacgccgcgt
tgggccatcgcccataaattcgccgccgaactggcctggacaaggctcgaggcgatcgac
atccaggtcggccgcaccggcgcgctcagcccggtcgcgcggctggtcccggtcacggtc
ggcggcgtcgtcgtctcgaacgcgacgctgcacaacgaggattacatcgccgggcgcggc
gccgacggccagccgatccgcggcgggcgcgacatccgcatcggcgactgggtacaggtc
taccgcgccggcgacgtgatcccgaagatcgccgatatcgacctcgcccgccggcccgcg
gacgcgcagccctatgtcttccccacccgttgccccgaatgcgggtcggacgcgctgcgc
gaggagggtgattcggtgcgccgctgcaccggcgggatggcctgcccggcgcaggctgtt
gaaaagctgaaacatttcgtcagccgcgccgccttcgacatcgaaggcctcggcgccagg
cagatcgaggccttcttccaagacgacctgctgccgatccgcgcgcccgccgacatcttc
acgctcgaggcgcgggacgcgaccaaccccttgcaaaagctgaaaaaccgcgatggctgg
ggcgagcgctccgcctccaacctgttccgcgccatcgacgaaaagcgcacgatcccgctg
aaccggctgatcttcgcgctcggcatccgccatgtcggggaaaccggcgccagcctgctt
gccgcccattacggcacctgggcggcgttcgaggccgcgatgaccgccgccgatcccgcg
gcgggcgaccccgaaaaaccccgcggcaatgccgaatggcaggacctgatcgccatcgac
ggcgtcggcccggtgctggcggcctcggtcgtgaccagcttccaccagccggccgagcgc
ggcgccatcaacgagctcgccgcgcatctggacgtgcagcccgtgatccgccgcgtggtg
acggacagccccgtcgccggcaagatcgtggtcttcaccggcacgctggagcgcatgacc
cgcgccgaggccaaggcccgggccgaggcgcttggcgccaaggtcgcgggttcggtctcg
gcccggaccgacattctggtcgccggcccgggcgcgggctccaaggccagcaaggccgcc
gatctgggggtgcaggtgatcgacgaggatgcctggctggcactgatcgggggatga

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