Delftia acidovorans: Daci_3592 Help Entry Daci_3592         CDS       T00620                                  Name (GenBank) DNA ligase, NAD-dependent   KO K01972   DNA ligase (NAD+) [EC:6.5.1.2] Organism dac  Delftia acidovorans Pathway dac03030   DNA replication dac03410   Base excision repair dac03420   Nucleotide excision repair dac03430   Mismatch repair Brite KEGG Orthology (KO) [BR:dac00001]  09120 Genetic Information Processing   09124 Replication and repair    03030 DNA replication     Daci_3592    03410 Base excision repair     Daci_3592    03420 Nucleotide excision repair     Daci_3592    03430 Mismatch repair     Daci_3592  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03032 DNA replication proteins [BR:dac03032]     Daci_3592    03400 DNA repair and recombination proteins [BR:dac03400]     Daci_3592 Enzymes [BR:dac01000]  6. Ligases   6.5  Forming phosphoric-ester bonds    6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)     6.5.1.2  DNA ligase (NAD+)      Daci_3592 DNA replication proteins [BR:dac03032]  Prokaryotic type   DNA Replication Elongation Factors    Elongation factors (bacterial)     Other elongation factors      Daci_3592 DNA repair and recombination proteins [BR:dac03400]  Prokaryotic type   SSBR (single strand breaks repair)    BER (base exicision repair)     DNA ligase      Daci_3592    NER (nucleotide excision repair)     GGR (global genome repair) factors      Daci_3592    MMR (mismatch excision repair)     DNA ligase      Daci_3592   DSBR (double strand breaks repair)    NHEJ (non-homologous end-joining)     SHDIR (short-homology-dependent illegitimate recombination)      RecET pathway       Daci_3592 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  DNA_ligase_aden DNA_ligase_OB HHH_2 BRCT HHH_5 DNA_ligase_ZBD PTCB-BRCT Nlig-Ia HHH BRCT_2 5_3_exonuc Motif Other DBs NCBI-ProteinID:  ABX36226 UniProt:  A9BZW4 LinkDB All DBs Position 3947764..3949875 Genome browser AA seq 703 aa AA seqDB search MNDNLDLFSGAAPAAPESGAAPDKVLAKVQALRAQLNQWAHEYYVLDTPTVPDGEYDRVF QQLQALEGAYPELVTPDSPTQRVIGAVLDGLMPVRHAVPMLSIRTETDNEATGAEAFDAR IRKELELAEGAPPVEYVAEPKFDGLAMNLRYENGRLVQATTRGDGEVGEDVTHNIRTIRK IPLSLPEGKGVPPVVEVRGEVYMGRADFVKLNERQQAAGGKSFANPRNAAAGSVRQLDSG IAAQRPLSFFAYGLGEITPAAQGGPDFVTHYAMLQTLRDWGFPVAPQVCIAKGAAELVAF HQRMGAERATLPYEIDGVVYKVNSLAQQRQLGFVSREPRWAVAHKYPAEEMPTRMEGIDI QVGRTGKLTPVARLAPVAVGGVIVTNATLHNLFEIRKKRVRTGDTVVVRRAGDVIPEVVG RVPGDRPAYVPNFRMPAACPICGSAVARPKGEANHRCTGGLFCPAQRKEAILHFAARRAM DIEGLGDKLVDQLVDGHVVRTLPDLYRLGLVALASLDRMAEKSAQNVLDALEKSKKTTLS RFLFGLGIRQVGESTAKDLARHFGQLDAIMDASVEQLLQVRDVGPIVAESIHTFFAQPHN REVVEQLRACGVHWEEGAAREQTAQPLAGMTVVLTGTLPTLGRDQAKEMLEAAGAKVSGS VSKKTSYVVAGAEAGSKLAKAEELGVTVLDEAGMLALLAGGDR NT seq 2112 nt NT seq  +upstreamnt  +downstreamnt atgaacgacaatctggatcttttctccggcgcagcccccgcggcgccggagtccggggcc gcccccgacaaggtgctggccaaggtgcaggcgctgcgcgcccagctcaaccaatgggcg catgagtactacgtgctggacacgcccaccgtgcccgacggcgagtacgaccgcgtcttc cagcaactgcaggcgctggaaggtgcctatcccgaactggtcacgccggactcgcccacg cagcgcgtgattggcgccgtgctcgacggcctgatgcccgtgcgccatgccgtgcccatg ctcagcatccgcaccgagaccgacaacgaggccacgggtgccgaggccttcgacgcacgc atccgcaaggagctggaactggccgaaggcgcgccgcccgtggagtacgtggccgagccc aagttcgacggcctggccatgaacctgcgctacgagaacggccgcctggtgcaggccacc acgcgcggcgacggcgaggtgggcgaggacgtcacgcacaacatccgcaccatccgcaag attccgctgtccctgcccgaaggcaagggcgtgccgcccgtggtcgaggtgcgcggcgag gtctacatgggccgcgccgacttcgtcaagctcaacgagcgccagcaggccgccggcggc aagagctttgccaatccgcgcaatgcggccgcaggctcggtgcgccagctggactcgggc attgcggcccagcgcccgctgtccttcttcgcctatggcctgggagagatcacgccggct gcccagggcggccccgacttcgtcacccactacgccatgctgcagacgctgcgcgactgg ggctttccggtggcgccccaggtctgcatcgccaagggcgcagccgagctggtggccttc caccagcgcatgggcgccgagcgcgccacgctgccctacgagatcgacggcgtggtctac aaggtcaacagcctggcccagcagcgccagctgggctttgtctcgcgcgagccgcgctgg gccgtggcccacaagtacccggccgaggaaatgcccacgcgcatggaaggcatcgacata caggtcggccgcacgggcaagctcacgcccgtggcgcgcctggcccccgtggcggtgggc ggcgtcatcgtcacgaatgccacgctgcacaacctgttcgagatccgcaaaaagcgcgtg cgcacgggcgacaccgtggtcgtgcgccgcgccggtgacgtgatccccgaagtcgtgggc cgcgtgcccggcgaccggccggcctatgtgcccaacttccgcatgcccgctgcatgcccc atctgcggcagcgccgtggcgcggcccaagggcgaggccaaccaccgctgcactggcggc ctgttctgcccggcgcagcgcaaggaggccatcctgcactttgccgcgcggcgcgccatg gacatcgagggcctgggcgacaagctcgtggaccagttggtggacggccacgtggtgcgc acgctgcccgatctctaccgcctgggcctggtggccctggcatcgctggaccgcatggcc gagaagtcggcccagaacgtgctggacgcgctggaaaaatccaagaagaccacgctgtcg cggttcctcttcggcctgggcatccgccaggtgggcgagtccacggccaaggacctggcc cgccacttcggccagctggacgccatcatggacgccagcgtcgagcaactgctgcaggtg cgcgacgtggggcccatcgtggccgagagcatccacaccttcttcgcccagccccataac cgcgaggtggtcgagcaactgcgtgcctgcggcgtgcactgggaagagggcgcggcgcgc gagcagaccgcccagccgctggccggcatgaccgtggtgctcacgggaacgctgcccacg ctgggccgcgaccaggccaaggagatgctggaggccgcgggcgccaaggtctccggctcg gtcagcaagaagaccagctatgtggtggctggcgccgaggccggcagcaagctggccaag gccgaggaactgggcgtgaccgtgctggacgaggccggcatgctggcgctgctggcaggc ggggaccgctga

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