Dactylosporangium sp. AC04546: KZZ52_07050
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Entry
KZZ52_07050 CDS
T10220
Symbol
ligA
Name
(GenBank) NAD-dependent DNA ligase LigA
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
dact Dactylosporangium sp. AC04546
Pathway
dact03030
DNA replication
dact03410
Base excision repair
dact03420
Nucleotide excision repair
dact03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
dact00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
KZZ52_07050 (ligA)
03410 Base excision repair
KZZ52_07050 (ligA)
03420 Nucleotide excision repair
KZZ52_07050 (ligA)
03430 Mismatch repair
KZZ52_07050 (ligA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dact03032
]
KZZ52_07050 (ligA)
03400 DNA repair and recombination proteins [BR:
dact03400
]
KZZ52_07050 (ligA)
Enzymes [BR:
dact01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
KZZ52_07050 (ligA)
DNA replication proteins [BR:
dact03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
KZZ52_07050 (ligA)
DNA repair and recombination proteins [BR:
dact03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
KZZ52_07050 (ligA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
KZZ52_07050 (ligA)
MMR (mismatch excision repair)
DNA ligase
KZZ52_07050 (ligA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
KZZ52_07050 (ligA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_aden
OB_DNA_ligase
HHH_2
BRCT
HHH_5
DNA_ligase_ZBD
HHH
PTCB-BRCT
BRCT_2
RNA_lig_T4_1
Nlig-Ia
Motif
Other DBs
NCBI-ProteinID:
WVK85151
LinkDB
All DBs
Position
1568937..1571021
Genome browser
AA seq
694 aa
AA seq
DB search
MSELEAEPTPEARQRHAELARELDEHQYRYYILQSPSVDDSLYDRLMRELEAIEAEFPAL
LTPDSPSQRVGGTFSTDFAAVTHAERMLSLDNALDDDELNAWVDRVERDAGSQPKYLCEL
KIDGLAVNLTYRDGRLVRAATRGDGRTGEDITLNARTIRDIPERLMGDDVPALLEVRGEV
FFTLAGFEEVNAAQVAAGERPFANPRNAASGSLRQKDPRITASRPMRMLVHGFGAREGFN
PAAQSEAYELMHAWGLPTSERWQVFDDLKGVRSYIAEYGEKRHKIEHEIDGVVVKIDQMS
IQRRLGSTSKAPRWAIAFKYPPEEAMTKLLDVEVNVGRTGRVTPFAVMEPVFVGGVTVAQ
ATLHNAQEVVRKGVLIGDTVVIRRAGEVIPEVLGPVADRRDGTERAFVMPTHCPSCKTLL
APEKESDVDIRCPNARYCPSQLRERLFGLAHRNALDIEALGWKSAAALLDGVIVNESELF
DVTADRLRESPFFVNQDGSLSSNAQQLLLNLEEVKQRPLARVLIALSIRHVGPTAAVALA
NSLGSMEAIANATTEELVSVEGVGPTIAKAVHDWFTVDWHREWVDRWTAAGVRMVEERTE
AGPRLLDGITVVVTGSLEKYSRDQATEAITSRGGKVTGSVSKKTHFVVVGESPGSKADKA
ATLKVPILDEAAFDLLLHEGPDAARAAAEATPDE
NT seq
2085 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaactcgaggccgagccgacccccgaagcgcgtcagcggcacgcggagctggcc
cgggagctggacgagcatcagtatcgctactacatcctccagtcgccgagcgtcgacgac
tcgctctatgaccggctcatgcgtgagctggaggcgatcgaggccgagttcccggcgctg
ctcacccccgactcgccgagccagcgcgtcgggggcacgttctcgaccgacttcgccgcc
gtcacgcacgccgagcggatgctcagcctcgacaacgcgctcgacgacgacgagctcaac
gcctgggtcgaccgggtcgagcgcgacgccggctcccagccgaagtatctgtgcgagctg
aagatcgacgggctggcggtcaacctcacctatcgcgacggccggctggtccgggccgcg
acccgcggcgacgggcgcaccggcgaggacatcacgctcaacgcgcgcacgatccgcgac
atcccggagcggctcatgggcgacgacgtgcccgcgctgctggaggtccgcggcgaggtg
ttcttcacgctcgccggcttcgaggaggtcaacgcggcccaggtcgcggcgggggagcgg
ccgttcgccaacccgcgcaacgcggccagcggcagcctccgccagaaggacccgcgcatc
accgcgtcccggccgatgcgcatgctggtgcacgggttcggcgcccgggaggggttcaac
ccggcggcccagtccgaggcctatgagctgatgcacgcctggggcctgccgacctcggag
cgctggcaggtgttcgacgacctcaagggcgtccggtcctacatcgcggagtatggcgag
aagcgccacaagatcgagcacgagatcgacggcgtggtcgtgaagatcgaccagatgtcg
atccagcgtcgcctcggctccaccagcaaggcgccgcgctgggcgatcgcgttcaagtat
ccgcccgaggaggccatgacgaagctcctcgacgtcgaggtcaacgtcggccgcaccggc
cgcgtgaccccgttcgccgtcatggagccggtgttcgtcggcggcgtgaccgtggcccag
gcgaccctgcacaacgcgcaggaggtcgtgcgcaagggcgtcctcatcggcgacacggtc
gtcatccgccgcgccggcgaggtgatcccggaggtgctcggcccggtcgccgaccgccgc
gacggcaccgagcgcgcgttcgtgatgcccacccactgcccgtcctgcaagacgctgctc
gccccggagaaggagagcgacgtcgacatccgctgccccaacgcgcgctactgcccgagc
cagctgcgcgagcgcctgttcggcctggcccaccgcaacgcgctcgacatcgaggccctc
ggctggaagtccgccgccgccctcctcgacggcgtgatcgtcaacgagagcgagctgttc
gacgtcaccgccgaccgcctgcgcgagtccccgttcttcgtcaaccaggacggctccctg
agcagcaacgcccagcagctcctgctcaacctggaggaggtcaagcagcgcccgctggcc
cgcgtcctgatcgccctgtcgatccgccacgtcggcccgacggcggcggtggccctcgcc
aactccctgggctccatggaggccatcgccaacgccaccacggaggaactggtctcggtc
gagggcgtaggcccgacgatcgccaaggccgtccacgactggttcacggtcgactggcac
cgcgagtgggtcgaccgctggaccgccgccggcgtccgcatggtggaggagcgcaccgag
gcgggcccccgcctgctggacggcatcacggtggtcgtgacgggctccctggagaagtat
tcgcgcgaccaggccacggaggccatcacctcccgcggcggcaaggtgaccggctcggtc
tcgaagaagacccacttcgtggtggtgggcgagtccccgggctcgaaggccgacaaggcc
gcaacgctgaaggtcccgatcctcgacgaggcggcattcgacctgctcctgcacgagggc
ccggacgccgcaagggccgccgccgaggcaaccccggacgagtag
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