Danio aesculapii (panther danio): 130228395 Help Entry 130228395         CDS       T11734                                  Name (RefSeq) TNF receptor-associated factor 2   KO K03173   TNF receptor-associated factor 2 [EC:2.3.2.27] Organism daes  Danio aesculapii (panther danio) Pathway daes04010   MAPK signaling pathway daes04137   Mitophagy - animal daes04141   Protein processing in endoplasmic reticulum daes04210   Apoptosis daes04217   Necroptosis daes04621   NOD-like receptor signaling pathway daes04622   RIG-I-like receptor signaling pathway daes04920   Adipocytokine signaling pathway daes05132   Salmonella infection daes05168   Herpes simplex virus 1 infection Brite KEGG Orthology (KO) [BR:daes00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    04141 Protein processing in endoplasmic reticulum     130228395  09130 Environmental Information Processing   09132 Signal transduction    04010 MAPK signaling pathway     130228395  09140 Cellular Processes   09141 Transport and catabolism    04137 Mitophagy - animal     130228395   09143 Cell growth and death    04210 Apoptosis     130228395    04217 Necroptosis     130228395  09150 Organismal Systems   09151 Immune system    04621 NOD-like receptor signaling pathway     130228395    04622 RIG-I-like receptor signaling pathway     130228395   09152 Endocrine system    04920 Adipocytokine signaling pathway     130228395  09160 Human Diseases   09172 Infectious disease: viral    05168 Herpes simplex virus 1 infection     130228395   09171 Infectious disease: bacterial    05132 Salmonella infection     130228395  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:daes03019]     130228395    04121 Ubiquitin system [BR:daes04121]     130228395 Enzymes [BR:daes01000]  2. Transferases   2.3  Acyltransferases    2.3.2  Aminoacyltransferases     2.3.2.27  RING-type E3 ubiquitin transferase      130228395 Messenger RNA biogenesis [BR:daes03019]  Eukaryotic type   mRNA surveillance and transport factors    mRNA cycle factors     Stress granule specific factors      130228395 Ubiquitin system [BR:daes04121]  Ubiquitin ligases (E3)   Single Ring-finger type E3    TRAF proteins     130228395 SSDB OrthologParalogGFIT Motif Pfam:  TRAF-mep_MATH MATH_2 TRAF_BIRC3_bd zf-TRAF TRAF2_zf TRAF3_RING zf-C3HC4 zf-C3HC4_2 zf-RING_6 ATG16 CCDC186_middle zf-C3HC4_4 Dynamitin Sina_ZnF At3g49055 CEP135_TSGA10_CC Plectin_PPL Motif Other DBs NCBI-GeneID:  130228395 NCBI-ProteinID:  XP_056312798 LinkDB All DBs Position 5:6064616..6090088 Genome browser AA seq 584 aa AA seqDB search MAAQEPSPPSSMENNKPGFPKKILANKLEDKHLCNCCQNILRRPFQAQCGHRFCSYCFNR TVGSGPQKCNACIKEDIFEEPTSILKQGCAFPDNAARREVENLPAVCFNEGCSWKGSIKD YELSHEGKCEFMILPCPLCKELIRFNEQERHNERECPERTLNCKYCKEPFHFKNIKAHDE ICPKYPMICEGCAKKKIPREKYVDHIKFCSKFRTPCRYHVVGCDMLVEKEKIHEHERACA HEHLNLLLHYIMGMKVSLEGLQPQSLDLAGHKAHELHQALRDLETRVSQLSGAPVQGVPS SSSSSSASSSSAPPPPAPTATLPTSFTPLPSSVGAALELQLHSEKTKVADLGRRCQELEV KAGTFEDVVCVLNREVERFATTMEASNRQHRLDQDKIEALSNKVRQLERQVGVKDLTVAE MEGRLREMSATTFDGVFIWRISDFTKKRQDAIAGRAPAMFSPAFYTSKYGYKMCLRIYLN GDGTGRGTHLSLFFVVMRGMSDALLKWPFNQKVTLMLLDQSNREHIIDAFRPDITSSSFQ RPVSEMNIASGCPLFCPLAKLEGKNSYIRDDTIFIKAIVDLTGL NT seq 1755 nt NT seq  +upstreamnt  +downstreamnt atggcagctcaagaaccctctcctccgtcctctatggagaacaacaagccagggttcccg aagaagattctggccaacaaacttgaagataaacatttatgcaactgctgtcagaacatt ctgaggagaccgttccaagctcagtgcggccatcgcttttgctcttactgcttcaaccgg actgttggatctggaccacagaaatgtaatgcctgcatcaaagaggacatcttcgaagag cccacgtcaatcctcaaacaaggctgcgcgtttcccgacaatgcagccagaagagaagtt gaaaatcttccagccgtgtgcttcaatgagggctgttcctggaaaggcagtattaaagac tatgagttaagccacgaagggaagtgtgagttcatgattctgccctgtcccttgtgcaaa gagctcattagatttaacgaacaggaacgtcacaacgaacgagagtgtcccgagagaacg ctcaactgcaaatactgtaaagaaccgtttcacttcaaaaacatcaaggcccatgatgag atctgtcccaaataccctatgatttgtgaaggatgtgcgaagaagaaaatccccagggaa aagtatgttgaccacattaagttctgcagcaaattcaggactccatgcagatatcatgtg gttggctgtgacatgttggtggagaaggagaaaattcacgagcacgagcgtgcctgtgcc cacgagcacctgaacctgctgctgcactacatcatgggcatgaaggtcagcctggagggt ctgcagccccagagcctggatctggcgggccacaaagcacacgagctgcaccaggcgctg cgggacctggagacgcgtgtcagtcagttaagtggagctcccgtgcagggggtcccgtcc tcatcatcttcctcttcggcctcttcatcctccgctccgcctccacccgcacccaccgcc acgctgcccacctccttcactcctctgcccagctcggtgggcgctgcgctggaactgcag ctccatagcgagaagaccaaggtggcggacctgggcaggcgctgtcaggagctggaggtg aaggccggtacgtttgaggacgttgtgtgtgtgctgaatcgagaggtggagcgattcgcc accaccatggaggccagcaaccgacagcacagactcgaccaggacaaaatagaggccctc agcaacaaggtgcgtcagctggagcgtcaggttggtgttaaagatctgactgtagcagaa atggagggccgactgagagaaatgtctgcaaccacgtttgacggcgtctttatctggagg atttcagacttcaccaaaaagagacaagacgccattgctggacgagcacctgccatgttt tcacctgcgttttacacaagtaagtacggctataagatgtgcctgcgcatttacctgaac ggggacgggacggggcgcgggacgcacctctcgctgttttttgtggtcatgagagggatg agcgacgcgctgctcaaatggcccttcaaccagaaggtgactctgatgctgctggaccag agtaaccgcgagcacatcatcgacgcctttcgtcccgacatcacgtcctcctcgttccag cgacccgtcagcgagatgaacatcgcaagcggctgcccgctcttctgcccactcgcaaag ctggagggcaagaactcctacattcgggacgacaccatcttcatcaaagccatcgtggac ctgaccggtctctag

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