Danio aesculapii (panther danio): 130230602
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Entry
130230602 CDS
T11734
Symbol
trim63a
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM63a
KO
K10655
tripartite motif-containing protein 63 [EC:
2.3.2.27
]
Organism
daes Danio aesculapii (panther danio)
Pathway
daes04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
daes00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
130230602 (trim63a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
daes04121
]
130230602 (trim63a)
Enzymes [BR:
daes01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
130230602 (trim63a)
Ubiquitin system [BR:
daes04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
130230602 (trim63a)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_UBOX
zf-C3HC4
zf-B_box
zf-RING_2
RING_XB3-XBAT31
zf-C3HC4_4
zf-RING_5
zf-C3HC4_2
zf-C3HC4_3
zf-RING_6
TRIM_CC
Sina_RING
CRLF3_N
zf-RING_11
ZorA-like_t1
UvrD_C
RNase_E_G
DUF8512
DUF1664
ARA70
Motif
Other DBs
NCBI-GeneID:
130230602
NCBI-ProteinID:
XP_056315683
LinkDB
All DBs
Position
6:complement(18424864..18426404)
Genome browser
AA seq
346 aa
AA seq
DB search
MDIQTGQIVRAPSPMESLEKQLSCPICLDMFTKPVVILPCQHNLCRSCASELYDSKNPYH
FSGGIFRCPTCRFEVVLDRHGVYGLQRNLLVENIIDIYKQQLEKGSNALEPPLKSKETKE
PMCDVHEDEKINIYCVTCQTPTCSMCKVFGQHKDCEVSTLKTVYEVQKSELKNSVDLLGA
SNSCLQVMLSQMEETCKTVEENSQAQKQKLGEKFDHLYAVLEDRKTHLLEQITQEQDEKV
AVIRSLVQQYNEQLQASIKLMDEASQTMDNNNTAEFLIAAKQLLTQAKDATKNSHLQRPE
PGFESMDHFTIDTEDVEAVLTKMDFVVGGNDNDDDEEEEEEEEEEE
NT seq
1041 nt
NT seq
+upstream
nt +downstream
nt
atggacattcaaacgggtcaaatagtccgggctccgagtcccatggagagcctggagaag
cagttgagctgtcccatctgcctggacatgttcacaaagccagttgtcattctcccgtgc
caacacaatctgtgccgcagctgcgccagtgaactctacgactccaaaaacccctaccac
ttctctggaggtatcttccgatgccctacttgtcgcttcgaggtggttctggaccgccat
ggtgtctatggcctgcagaggaaccttctggtggagaacatcattgacatctacaagcag
cagttggagaaaggaagcaatgcccttgaaccccctttgaaatccaaagaaacaaaagag
cccatgtgtgatgttcacgaagatgaaaagatcaacatctactgcgtaacctgccagaca
cccacttgctccatgtgcaaggtattcggtcagcacaaagactgtgaagtttccactcta
aaaactgtttatgaggttcagaagtctgagcttaaaaattcagttgatctactaggtgcc
agcaacagctgtctgcaggtgatgttatcgcagatggaggaaacctgcaaaacagtggaa
gaaaacagccaggcacagaagcagaagttgggggagaagtttgaccatctctatgccgtt
ctagaagaccgtaagacacatcttctggagcaaatcacccaggaacaggatgagaaggtg
gctgtgatcagatctctagtccagcagtacaatgagcagctgcaggccagcattaagctg
atggacgaagcctcccaaaccatggacaacaacaatacagcagagttcctcatcgctgct
aaacagctcctcacccaagccaaagatgcaaccaagaactctcatctacagaggccagag
cccggttttgagagtatggaccacttcacgattgacactgaagatgtagaggccgtactt
acaaaaatggactttgtagttggtggtaatgataatgatgatgatgaggaggaagaagaa
gaagaagaagaggaggaataa
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