KEGG   Danio aesculapii (panther danio): 130245049
Entry
130245049         CDS       T11734                                 
Symbol
smndc1
Name
(RefSeq) survival of motor neuron-related-splicing factor 30
  KO
K12839  survival of motor neuron-related-splicing factor 30
Organism
daes  Danio aesculapii (panther danio)
Pathway
daes03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:daes00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    130245049 (smndc1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:daes03041]
    130245049 (smndc1)
Spliceosome [BR:daes03041]
 Complex A
  U2 snRNP components
   U2 related factors
    130245049 (smndc1)
 Complex B
    130245049 (smndc1)
 Other splicing related proteins
  Proteins involved in snRNP biogenesis
   Other proteins involved in snRNP biogenesis
    130245049 (smndc1)
SSDB
Motif
Pfam: SMN_Tudor DUF7671 TUDOR DUF2067 Fis1_TPR_C Leu_zip
Other DBs
NCBI-GeneID: 130245049
NCBI-ProteinID: XP_056333658
LinkDB
Position
17:complement(32411192..32418414)
AA seq 237 aa
MSEELMKQLSNYKAQLQQVEAALSIDPDNEDLLKLQKDLQEVIELTKDLLTSQPAEGTTS
TKSSETVAPSHSWRVGDHCMATWSQDGQVYEAEIEEIDNENGTAAITFAGYGNAEVMPLH
VLKKVEEGRIREDIDGKPKSKKELQAEQREYKKKKAQKKVQRMKELEQEREDQKSKWQQF
NNKAYSKNKKGQVKRSIFASPESVNGKVGVGTCGIADKPMTQYNDTSKYNVRHLMPQ
NT seq 714 nt   +upstreamnt  +downstreamnt
atgtctgaagagttgatgaagcaactgagcaattataaagctcagctgcagcaagtggaa
gcggcgctttctatagatccagataatgaagatctgcttaaactacagaaggaccttcag
gaggtgattgagttgacaaaagacctgttgacatcacagccagcagagggtactaccagc
accaaaagctcagagacggttgctccgtctcacagctggagggtcggagaccattgcatg
gccacctggagccaggatggacaggtgtatgaggcagaaattgaggagattgacaatgag
aacggcacagcagctatcacctttgctggctatggaaacgctgaggtgatgcctcttcat
gtgctcaaaaaagtggaggagggccggataagagaagatatagatggaaaacccaaatcc
aagaaagagctgcaggcagagcagagggaatacaagaagaaaaaggcccagaagaaggtt
cagcgcatgaaggagctggagcaggagagagaagatcagaaatccaaatggcagcagttt
aacaataaagcatattccaaaaataagaaaggacaggttaaaaggagtatattcgcttct
ccagagagtgtgaatggaaaggttggcgtcggtacatgtggaatcgcagataaacccatg
actcagtacaatgacacttcaaagtataacgtcaggcacttaatgccccagtga

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