Diachasma alloeum: 107038531
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Entry
107038531 CDS
T07663
Name
(RefSeq) 116 kDa U5 small nuclear ribonucleoprotein component
KO
K12852
116 kDa U5 small nuclear ribonucleoprotein component
Organism
dam
Diachasma alloeum
Pathway
dam03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
dam00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
107038531
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
dam03041
]
107038531
Spliceosome [BR:
dam03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
107038531
Complex C
U5 SnRNP specific factors
107038531
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
EFTUD2
EFG_C
EFG_IV
GTP_EFTU_D2
EFG_III
EFL1
MMR_HSR1
Roc
Ras
PDEase_I
Motif
Other DBs
NCBI-GeneID:
107038531
NCBI-ProteinID:
XP_015113171
LinkDB
All DBs
Position
Unknown
AA seq
979 aa
AA seq
DB search
MDADLYDEFGNYIGPDLASESEDENEYDNVGDDTDERERSDEEMEEDKDEQRDNLEQQSM
SVVLHEDKRYYPSALEVYGPDVETLVQEEDAQPLDKPLIAPTKRCKFQIKEQELPETTYN
IEFLADMMDTPHLIRNVVLLGHLHHGKTTLVDCLVRQTHPNIHSVTDEKPLRYTDTLFTE
QQRGVSTKATPVTLLLQDVKSKSYLMNIFDTPGHVNFSDEATAAIRMSDGAILVVDAAEG
VLLNTERLLKHAIQEKLALTVCINKIDRLILELKLPPLDAYYKLRHIIEEINGLIALYSD
SDNPTFVSPAMGNVCFASSEYNVCFTLKSFVALYARQYSNININEFSKRLWGDLYFNSKT
KKFMKKPPHNTAQRSFIEFILEPLYKIFAQVVGDVDTTLPSVLDELGIRLTSEEMKMNIR
PLLRLVCTRFFGDLSGIVDMCVHHVPSPQEHASSKVQHVYTGPMESDLAKDMINCNPDGR
LMIHSTKMYPTEDCTLFVVLGRIMSGTLEAGQKVRVLGEAYSRADEEDSRVLSVGRLWIS
EARYSIELSRVPAGNWVLIEGIDRPIVKTSTITDINNSQDLHIFRPLKFNTQSVIKIAVE
PVNPSELPKMLDGLRKVNKSYPLLGTRVEESGEHVVLGTGELYLDCAMHDLRKMYSEIDI
KVADPVVAFAETVVETSSLKCFAETPNKRNKLTMIAEPLERGLAEDIEAENVKITWNKKR
LGEFFQTKYDWDLLAARSIWAFGPDSTGPNILVDDTLPSEVDKALLSSAKDAIVQGFQWG
TREGPLCEEPIRNVKFKILDAVIAPEPLHRGGGQIIPTARRVAYSAFLMATPRLMEPYLF
VEVQAPADCVSAVYTVLAKRRGHVTQDAPVPGSPLYTIKAFIPAIDSFGFETDLRTHTQG
QAFCLSVFHHWQIVPGDPLDKSITIRPLEPQPATHLAREFMLKTRRRKGLSEDVSINKFF
DDPMLLELARQDVLLNYPL
NT seq
2940 nt
NT seq
+upstream
nt +downstream
nt
atggatgccgacctctatgacgagtttggcaattatattggccccgatttagcctctgaa
tctgaagatgaaaatgaatatgataatgttggagatgatactgatgagcgagaacgatca
gatgaagagatggaggaggataaagatgaacagagggataatttggagcaacaatcaatg
tcggtagttttgcatgaggataaaagatattatccaagtgccctagaagtttatgggcca
gatgtggaaactctggttcaagaagaagatgcccagccattggacaaaccactgattgcc
ccaacaaaaagatgcaagtttcaaataaaagaacaggaattaccagagacaacttacaat
attgaatttcttgctgatatgatggatacaccccatttaattcgtaatgttgtacttttg
ggtcatcttcatcatggaaaaacaacgcttgttgattgtctggtaagacaaacacatccc
aacattcacagtgtaacagatgaaaaacccctgagatatacagacactctatttactgag
caacagcgtggtgtctctacaaaagccactccagtgactttgctcttgcaagatgtcaaa
tcaaaatcctacctaatgaacatctttgatactccagggcatgtgaatttttccgacgaa
gcaacagctgcaataagaatgtcagatggggctattctagttgttgatgcagctgaggga
gttttattgaatacagagcgactcttgaaacatgcaatccaggaaaaattagctctaact
gtttgcataaacaaaattgatcgactcatattggaattgaaactacctcctctggatgct
tattacaaattgcgtcacataattgaagaaattaatggtctaattgccctttactcagac
agtgataatccaacttttgtttcaccagcaatgggcaacgtttgtttcgcctcatcagag
tacaatgtctgcttcacattgaaatcctttgtagccctttatgctcgacaatattccaat
attaatatcaatgaattctcaaagagactctggggtgatttgtacttcaattcaaagact
aaaaaatttatgaaaaaacctccacataatactgcacaaagatcttttattgaatttatc
ctggagcctctctacaagatttttgctcaagttgttggtgatgtagatacaacattaccc
tcggtactggatgaattgggtattagattgacatcggaggaaatgaaaatgaacatcaga
cccctgttgagactagtctgcacaagattttttggtgatttgtccgggatcgtagatatg
tgtgtgcatcatgtaccaagtcctcaggagcacgcatcatccaaggtacagcacgtttat
acaggtcctatggagtcagatttagctaaggatatgataaattgtaatcccgatggaaga
ctcatgatacacagtactaaaatgtatcccactgaggattgcacattatttgttgttctt
ggaagaataatgtcgggaactttggaggcaggccaaaaagttcgagttcttggtgaagca
tattccagagctgatgaagaagattcgagagttttaagtgttggtagactttggatcagt
gaagccagatattccattgaattatctagagtacctgctggcaattgggttttgattgag
ggcattgataggcccattgtcaaaaccagcactattacagatatcaataattcccaagat
ttgcacatattcagaccattgaaattcaatacccagagtgttataaaaattgctgttgag
ccagtcaatccgtcagagttgcccaaaatgttggatggactcagaaaagtcaataagagt
tatcctctattgggcactagggttgaggagagtggtgaacatgttgttttggggactgga
gagctttatttggactgtgctatgcacgatttgagaaaaatgtattcagaaattgatatc
aaagtggcagatcctgtcgtagcttttgcagaaactgttgtcgaaacgagctctctcaag
tgttttgctgaaacgcccaacaagagaaataagttgaccatgattgccgagcctttggaa
agaggtttggcagaggacattgaagctgaaaatgtgaagatcacatggaacaaaaaacgc
ttgggtgaattttttcaaacaaagtacgattgggatcttctggcagcgagaagtatctgg
gcatttggacctgactctactgggccaaatattcttgttgatgataccctaccctcggaa
gttgataaagcattgttaagtagtgctaaagatgccattgtgcagggtttccaatggggg
acgagagagggtcctttatgcgaagaaccaattcgcaatgtcaaattcaaaattttggat
gctgttattgcacctgagcctctacacaggggtggaggacaaatcattccaactgcccga
cgtgttgcctattcggcatttttaatggcaactccacgtttgatggaaccctatttattt
gtagaagtccaagctcctgctgactgtgtttccgctgtttacacagttcttgccaaacgt
cgtggtcatgtcacacaagatgcaccggtacctggaagccctctctacacaattaaggca
tttataccagccattgacagttttggctttgaaacagatcttcggacgcatacacaagga
caagccttttgtttgtcagtatttcaccattggcaaattgttcccggtgatccgctggat
aaaagtataacaattagaccattggaacctcagcccgctacacacttggcacgagaattt
atgctcaaaacgagaaggaggaaaggactctctgaggatgtttctatcaacaagttcttc
gatgatcccatgttgcttgaattggctcgtcaagatgtccttttaaattacccactttga
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