Desulfobacca acetoxidans: Desac_0602
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Entry
Desac_0602 CDS
T01454
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-d iaminopimelate ligase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
dao
Desulfobacca acetoxidans
Pathway
dao00300
Lysine biosynthesis
dao00550
Peptidoglycan biosynthesis
dao01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
dao00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
Desac_0602
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
Desac_0602
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
dao01011
]
Desac_0602
Enzymes [BR:
dao01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
Desac_0602
Peptidoglycan biosynthesis and degradation proteins [BR:
dao01011
]
Precursor biosynthesis
Amino acid ligase
Desac_0602
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
Motif
Other DBs
NCBI-ProteinID:
AEB08488
UniProt:
F2NG75
LinkDB
All DBs
Position
complement(712420..714015)
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AA seq
531 aa
AA seq
DB search
MSGLDGPAGKNLAQLLSGLKYLRIWGDEQVPVQGLAYHSGRVASGEVFVALKGCQTDGHL
YIDKAIERGAAVVVLEDAVEPTPGVVCVQVPDTRLALAHMAAAFYDHPSCNLTVVGITGT
NGKTTTSYLLEAIWQASGAQVGVIGTVNCRFGSQVRSSPVTTPESLDLQDLLAEMRAAAV
DCAIMEVSSHALDLKRVQAVRFAAGLFTNLSQDHLDYHGDMESYFAVKSRLFCELLTDCG
DGPQLAVINRDDPWGQKLLPQTSPPVLTYGFAAGADIRPEDITLTHQGIQARLHTPYGRL
DIVSPLMGRYNLYNILAASGAALGLGISPEHVVTGLANITGVDGRLEPVAAPGQPLVLVD
YAHTPDALEKVLAALKALDFDRIITVFGCGGDRDRRKRPLMGQVVARGSDVVIITSDNPR
TEEPLAIIEDILAGLREMNCPRLDVSEAREGHRGYLVIADRRQAIRQAIAIGNPGEVILL
AGKGHETYQILGTRRIHFDDREEAAAALSARAKNVTDPDKLRQAANRRKGA
NT seq
1596 nt
NT seq
+upstream
nt +downstream
nt
ttgtccggattagacggcccagccggtaaaaacctggcacaactcttgagtgggttgaag
tatctgcgtatctggggagacgaacaggtcccggttcagggattggcttaccattccggc
agagtagcctcgggtgaggttttcgtagccctcaagggctgccaaacagatggtcatctc
tatatcgacaaggctatcgagagaggcgcagccgtcgtggtgctggaagatgcagtcgaa
cctactcctggagtggtttgcgttcaagttcctgatacccgcctggcactggcgcatatg
gcggcggccttttatgatcatccttcttgcaacctgaccgtggtcggcattaccggcaca
aacggcaaaaccacgacatcgtatctgttagaggctatctggcaggccagcggcgcccaa
gtgggggttatcggcaccgtgaactgccgtttcggttcccaggtgcgctcctcgccggta
acgacgccggagtcgctggacctgcaagatttactggctgaaatgcgggctgccgcggtt
gattgcgccataatggaggtatcctctcacgccctggatttgaagcgggtgcaggcggtg
cggtttgctgcgggactgttcaccaatctatcgcaggaccatctggattatcatggcgat
atggaatcgtattttgccgttaagagccgtcttttctgcgaactgttgacagactgtggc
gatggcccgcagttggcggtgatcaatcgggatgacccctgggggcagaaactgctgccg
cagacctcgccgccggtgttgacctatgggtttgccgcgggcgctgatatccggccagag
gacattaccctgacgcaccagggtattcaggctcggttacatactccctatggcagattg
gacattgtttcgcccctgatgggtcgctacaatctctataatatccttgccgccagcgga
gcggccctgggtctggggatcagtccggagcacgtagtcaccgggttggccaacatcacc
ggggtggatggcagattagagccggtagcggcgcccggacagcccctggtcttggttgac
tatgcccatacgccggacgccctggagaaagtcctggccgctttaaaggcactagatttc
gaccggataatcactgtcttcggctgcggcggcgatcgggaccggcgcaaacgccccctg
atgggccaggtggtggcccggggcagcgatgtggtcataattaccagcgacaacccgcgt
acggaggagcctttagcaatcatcgaagatattcttgcaggcttgagagagatgaactgc
ccccgactcgatgtttctgaagctcgagagggtcaccggggctatctggtgattgccgac
cgccggcaggctatccgtcaggcgatcgccatcggcaatcctggtgaggttatcttactg
gccggtaaaggacacgaaacctaccagatactgggaaccaggcggattcattttgatgat
cgggaagaagcggcggcggcgttatctgccagggccaaaaatgtaacagatcctgacaag
ctgcgacaagctgccaatcggaggaagggggcatga
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