Dickeya aquatica: DAQ1742_00435
Help
Entry
DAQ1742_00435 CDS
T06021
Symbol
metC
Name
(GenBank) Cystathionine beta-lyase
KO
K01760
cysteine-S-conjugate beta-lyase [EC:
4.4.1.13
]
Organism
daq
Dickeya aquatica
Pathway
daq00270
Cysteine and methionine metabolism
daq00450
Selenocompound metabolism
daq01100
Metabolic pathways
daq01110
Biosynthesis of secondary metabolites
daq01230
Biosynthesis of amino acids
Module
daq_M00017
Methionine biosynthesis, aspartate => homoserine => methionine
Brite
KEGG Orthology (KO) [BR:
daq00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
DAQ1742_00435 (metC)
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
DAQ1742_00435 (metC)
Enzymes [BR:
daq01000
]
4. Lyases
4.4 Carbon-sulfur lyases
4.4.1 Carbon-sulfur lyases (only sub-subclass identified to date)
4.4.1.13 cysteine-S-conjugate beta-lyase
DAQ1742_00435 (metC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cys_Met_Meta_PP
Met_gamma_lyase
Aminotran_5
DUF2789
Motif
Other DBs
NCBI-ProteinID:
SLM61536
UniProt:
A0A375A6I6
LinkDB
All DBs
Position
complement(444780..445817)
Genome browser
AA seq
345 aa
AA seq
DB search
MTSKKIATTLVAAGRSKRVTQGAVNPVIQRASSLVFDSVQEKKHATINRAKGGLFYGRRG
TLTHFALQDAMTELEGGAGCALYPCGAAAIANAITSFVSAGDHLLVTGSAYEPTQDFCNK
VLGKMNIRTTFFDPMVGEGIAALIQPNTRVVFLESPGSITMEVQDVPAIVAAVRRVNPDI
IIMIDNTWAAGVLFRPLALGVDISIQSATKYIVGHSDAMLGTAVANARCWDQLREQSYLM
GQMADADSAYMASRGLRTLGCVCSSIRKMACVSLTGWQSAQKWLSSSILHYRAVKAMRFS
PGISAAATGYSRLCYGKNSAPRNWRTTLTTSATSVWRIHGVVLSR
NT seq
1038 nt
NT seq
+upstream
nt +downstream
nt
atgacaagtaagaaaatagccaccacgctggtggctgccggacgcagcaagcgcgtcacc
cagggggccgtcaacccggtgattcaacgcgcctcttctctggtatttgacagtgtgcag
gaaaaaaaacacgccacgattaaccgcgccaaaggggggctgttctatggccgccgaggc
accctgacccactttgccttgcaagatgccatgaccgagctggaaggcggtgccggttgt
gcgctctacccctgtggcgcggccgcgattgccaacgccatcacctcatttgttagcgca
ggcgatcacctgttagttaccggttccgcctacgaacccacgcaggatttttgtaacaaa
gtgctgggtaaaatgaacatccgcaccacctttttcgacccgatggttggcgaagggatt
gcggcactcattcagcccaacacccgggtggtgtttctcgaatctcccggctccatcacg
atggaagtgcaagacgttccggccattgtcgccgccgttcgccgcgtaaacccggatatt
atcatcatgatcgacaatacctgggccgcaggggtgctgttccggccgctggcgctcggt
gtggatatctcgattcaatcggcaaccaagtatattgtcgggcattccgatgccatgtta
ggcacggcggtcgccaatgcccgctgctgggatcaactgcgcgagcaatcctacctgatg
gggcaaatggctgacgccgatagcgcctatatggccagccggggcttacgtactctgggg
tgcgtttgcagcagcatcaggaaaatggcctgcgtatcgctcactggctggcagagcgcc
cagaagtggctgtcgtcaagcatcctgcactaccgggctgtaaaggccatgcgtttttca
cccgggatttcagcggcagcaacgggttattctcgtttgtgctacgggaaaaactcagcc
cctcgcaactggcgaactaccttgaccacttcagccacttccgtatggcgtattcatggg
gtggttttgagtcgctga
DBGET
integrated database retrieval system