Dickeya aquatica: DAQ1742_01975
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Entry
DAQ1742_01975 CDS
T06021
Symbol
ypdA
Name
(GenBank) putative sensor protein, responsive to pyruvate
KO
K27884
two-component system, LytTR family, high-concentration pyruvate sensor kinase [EC:
2.7.13.3
]
Organism
daq
Dickeya aquatica
Pathway
daq02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
daq00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
DAQ1742_01975 (ypdA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
daq01001
]
DAQ1742_01975 (ypdA)
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
daq02022
]
DAQ1742_01975 (ypdA)
Enzymes [BR:
daq01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.13 Protein-histidine kinases
2.7.13.3 histidine kinase
DAQ1742_01975 (ypdA)
Protein kinases [BR:
daq01001
]
Histidine kinases
LytTR family [OT]
DAQ1742_01975 (ypdA)
Two-component system [BR:
daq02022
]
LytTR family
PyrS-PyrR (pyruvate reutilization)
DAQ1742_01975 (ypdA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
5TM-5TMR_LYT
His_kinase
HATPase_c
GAF
ECF_trnsprt
ECF-ribofla_trS
GAF_2
HATPase_c_2
GAF_3
DUF485
DUF3792
Motif
Other DBs
NCBI-ProteinID:
SLM62904
UniProt:
A0A375A9W0
LinkDB
All DBs
Position
1996011..1997711
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AA seq
566 aa
AA seq
DB search
MQSTFNMLLAVYDRAALMLICLFFLTRTRHFRQLLQQDEHSRFDLAVVTAIFSLFALFST
WSGINVDGSLVNVRVVAVMSGGILFGPWVGITTGVIAGVHRYLIDMQGITSVPCLITSIV
AGLMSAWIHQRIARERHWSMGIVGGMLCESLTMLLVVLWARPLSLGLDIVAHIAIPMILG
TVSIGLIVLLVRSVEGEKEAIAARQAKLALDIANKTLPLFRHVNSESLRAVCEIIRRDIN
ADAVAITNTSAVLAYVGVGEANYHGGERYLSPTTQLALKSGKIIIKNNDEAYRTPEIHSM
IVIPLREKGDVTGTLKIYYRHAHRITWSLKEMAIGLSQIISTQLEVSRAEQLREMANRAE
LRALQSKINPHFLFNALNAIATSIRLNPDTARQLIINLSRYLRYNLERNEEELIDIKSEL
YQVKDYIAIEQARFGDKLTVIYDIDEEVSCQIPGLLIQPLIENAIVHGIRPCKGNGVVTL
SIHPQGKRIRVAVRDTGRGIDDEVIARVERNALPGNHIGLLNVHHRIRLLYGEGLHIRRL
DPGTEITFFITPDNPSQTESRVAFPS
NT seq
1701 nt
NT seq
+upstream
nt +downstream
nt
atgcaatcgacgtttaacatgctgctggcggtgtatgaccgcgcggcactgatgctgatt
tgcctgttttttctcacccggacacgccattttcgccagttacttcagcaagatgaacat
tcccgttttgatttggctgtcgtcaccgcaattttctcgctatttgccctgtttagtacc
tggtctggcattaatgtggacgggtcactggtcaatgtgcgggtggtagcggtgatgtct
ggtggtattttgttcgggccgtgggtggggatcaccacaggcgttatcgccggtgtacat
cgttatctgattgacatgcaagggattacatcagtcccttgtcttattaccagcattgta
gccgggctgatgtcggcctggatacaccagcgcattgcgcgcgagcgccactggagcatg
ggtatcgttggcggcatgctgtgcgagtcgctgacgatgctgttagtggtactgtgggcc
aggcccttgtcactggggctggatattgttgctcatattgccattccgatgattttaggc
acggtcagtatcgggttgattgtgctgctggtgcgtagcgtggaaggggaaaaagaggcg
attgccgcccggcaggccaagctggcgctggatattgccaataaaacgttaccgttattt
cgtcatgttaacagcgagtcattgcgtgcggtgtgcgagattattcgccgcgatatcaat
gccgatgcggtggccattaccaatacctctgcggtgctggcgtatgtgggggtcggagag
gcgaattaccacggcggcgagcgctatctgagcccgacgacccagcttgcgctgaaaagc
gggaagatcatcatcaaaaacaacgatgaggcttaccgcaccccagagattcattcgatg
attgttattccactgcgggaaaaaggtgatgtgaccgggacgctgaaaatttattaccgc
cacgctcaccgcatcacctggtcgctcaaagagatggcaattgggttgtcacaaatcatt
tctacccagcttgaggtgtcgcgcgccgaacagttacgagagatggccaaccgtgccgag
ttgcgggccttgcagagtaaaattaacccgcacttcctgtttaatgcgctcaatgcgatt
gcaacatccattcggctaaacccggataccgcgcgtcagttgattatcaacctgtcgcgt
tatctgcgctataatctggagcgcaatgaagaagaactgattgatatcaaaagcgaactt
tatcaagtcaaggattacattgccattgagcaggcgcgttttggcgataagctgacggtg
atttatgacatcgatgaagaggtcagttgtcagattcccggtttgctgattcaaccgctg
attgaaaatgcgattgtgcatggcattcgtccatgcaaaggcaacggggtggtgacattg
agcattcatccgcaaggcaagcgtattcgggttgcggtgcgagacaccgggcgcggcatc
gatgatgaggtgatagcgcgcgttgaacgtaacgcactgcccggtaatcatattggtctg
cttaatgtgcatcatcgtatccggttgttgtatggcgaagggttgcacattcgtcgatta
gacccaggtacggaaattacgttttttattaccccggataacccgtcacagacagagagc
cgcgtggcgtttccgtcatga
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