Dickeya aquatica: DAQ1742_03812
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Entry
DAQ1742_03812 CDS
T06021
Symbol
lpxC
Name
(GenBank) UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase
KO
K02535
UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:
3.5.1.108
]
Organism
daq
Dickeya aquatica
Pathway
daq00540
Lipopolysaccharide biosynthesis
daq01100
Metabolic pathways
Module
daq_M00060
KDO2-lipid A biosynthesis, Raetz pathway, LpxL-LpxM type
Brite
KEGG Orthology (KO) [BR:
daq00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
DAQ1742_03812 (lpxC)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
daq01005
]
DAQ1742_03812 (lpxC)
Enzymes [BR:
daq01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.108 UDP-3-O-acyl-N-acetylglucosamine deacetylase
DAQ1742_03812 (lpxC)
Lipopolysaccharide biosynthesis proteins [BR:
daq01005
]
Lipid A
DAQ1742_03812 (lpxC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LpxC
Motif
Other DBs
NCBI-ProteinID:
SLM64604
UniProt:
A0A375AER7
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All DBs
Position
complement(3814636..3815568)
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AA seq
310 aa
AA seq
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MRENTMIKQRTLKRIVQATGVGLHTGKKVTLTMRPAPANTGVIYRRTDLNPPVDFPADAK
SVRDTMLCTCLVNEHDVRISTVEHLNAALAGLGIDNIMIEVDAPEIPIMDGSASPFVYLL
LDAGIEELNCAKKFLRLKQTVRVEEGDKWAELKPFNGFSLDFTIDFNHPVIDAGSQRFKL
DFSADAFVRQISRARTFGFMRDIEYLQSRGLCLGGSFDCAIVVDDYRVLNEDGLRFDDEF
VRHKMLDAIGDLFMCGHNIIGAFTAFKSGHALNNKLLQAVLARQEAWELVTFEDEAEMPL
AFKAPSTVLA
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
atgcgagagaatacgatgatcaaacaacgtacactaaaacgtattgtacaggcgacaggg
gtcgggcttcataccggcaagaaagtcaccctgactatgcgccctgcaccggcaaacacc
ggggtcatctatcgtcgtactgacttgaatccaccggttgatttcccggctgatgccaaa
tccgtgcgtgataccatgctctgtacttgcctggttaatgagcatgacgtgcgtatttca
accgtggagcatctgaatgcggctctggcgggattggggatcgacaatattatgattgaa
gtcgatgcgccggaaatcccgattatggatggtagcgccagtcctttcgtttacctgttg
ctggatgccggaatcgaagaactgaattgtgccaaaaagttccttcgcctcaagcagact
gttcgggtggaagaaggcgacaagtgggccgaattgaagccgttcaacggttttagtctg
gattttaccattgatttcaatcacccggtgattgatgccggttcacagcgttttaaactg
gacttctctgcggatgcgttcgttcgccagattagccgggcgcgtactttcggttttatg
cgcgatatcgaatacctacagtcacggggtctgtgtctgggcggaagcttcgactgtgcc
atcgtggttgatgattaccgtgtgttgaatgaagatggtttacgctttgatgatgaattt
gttcgtcacaagatgctcgatgccatcggtgatttgttcatgtgcgggcacaatatcatt
ggtgcatttacggcgtttaaatctggtcacgcgctgaataacaagctgttgcaggctgtg
ctggccaggcaggaagcgtgggagcttgttacctttgaagatgaggcggaaatgccgctg
gctttcaaagcgccctctaccgtgttggcttga
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