Dickeya aquatica: DAQ1742_04320
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Entry
DAQ1742_04320 CDS
T06021
Symbol
vfmO
Name
(GenBank) D-alanine--poly(phosphoribitol) ligase subunit 1
KO
K03367
D-alanine--poly(phosphoribitol) ligase subunit 1 [EC:
6.1.1.13
]
Organism
daq
Dickeya aquatica
Pathway
daq00470
D-Amino acid metabolism
daq00552
Teichoic acid biosynthesis
daq01100
Metabolic pathways
daq01503
Cationic antimicrobial peptide (CAMP) resistance
daq02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
daq00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
DAQ1742_04320 (vfmO)
09107 Glycan biosynthesis and metabolism
00552 Teichoic acid biosynthesis
DAQ1742_04320 (vfmO)
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
DAQ1742_04320 (vfmO)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01503 Cationic antimicrobial peptide (CAMP) resistance
DAQ1742_04320 (vfmO)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
01504 Antimicrobial resistance genes [BR:
daq01504
]
DAQ1742_04320 (vfmO)
Enzymes [BR:
daq01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.13 D-alanine---poly(phosphoribitol) ligase
DAQ1742_04320 (vfmO)
Antimicrobial resistance genes [BR:
daq01504
]
Gene sets
CAMP resistance modules
Cationic antimicrobial peptide (CAMP) resistance, dltABCD operon [MD:
M00725
]
DAQ1742_04320 (vfmO)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-ProteinID:
SLM65069
UniProt:
A0A375AHD4
LinkDB
All DBs
Position
4322574..4324133
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AA seq
519 aa
AA seq
DB search
MCTVAAWQYLVSLFARFDGVQSAAAYSVNGDLRYHQLYHSALTLAAQLQAHHQASGHPQP
APVLLYGHKHPASLAGWWACLLTGHPVVPVENDNTAERLRFIADGIQAGLLLNASEHAAP
ECGLPVILATVLSEARMPDTDTPQTLAALCQHMEHAFGHKKVSGIAYIMFSSGTTGAPKG
IQVSYPNLAHFVRWAVEHFADPGPVSGNIRYCFDVSQYELWLAWYYRQPLCVLDYRDVIN
TRKMIARHADAGTQTWVSTPSLTRNYLRDKSFCQQNLPALNQFIFCGEVLSKELVQALQH
AFPGCRLVNTYGPTECTVAVSACDITPSMLEHDAPLPLGTARPGVTLRIEGEAARGEIII
TGDAVSAGYLNASPAQQARFFTDASGVRGYRTGDIGSLRDGLLYFHGREDSELKIQGYRV
VISDIENALRAHPLVQDAIVTPWLLRGVAQGLQAFVLADQPDIFPQLADYLRRYFPVYMV
PKFWYPVEEAALNHNSKLDRLRVTEQAIDKGKRYVFVSS
NT seq
1560 nt
NT seq
+upstream
nt +downstream
nt
ttgtgcacagtagccgcatggcagtatctggtttcgctgtttgcgcgctttgatggcgtg
cagagcgctgcggcgtatagcgtgaacggcgatctccgctaccaccagctctaccacagc
gccctgacgctggctgcgcaactccaggcccaccatcaggcaagcggacacccacagccc
gcgccagtgctgctgtatggtcacaaacacccggcaagtctggcagggtggtgggcctgc
ctgctcaccggccacccggtggtgccggtagaaaacgacaataccgctgaacggctgcgc
tttatcgccgacggtattcaggccggcctgctgttaaacgccagcgagcacgctgcacct
gagtgtggcttgccggttatcctcgccacggtactcagtgaagcgaggatgccggatacc
gacactccccagacgctcgccgcactctgccagcacatggagcacgcctttggccataaa
aaggtgagcggcattgcctatatcatgttctcttccggcaccactggcgcgcccaaaggg
atccaggtcagctacccgaatctggcccattttgtgcgctgggccgttgaacactttgcc
gaccccggcccggtcagtggcaatattcgctactgttttgacgtcagccaatacgagctg
tggctcgcctggtattaccgccagccgctgtgcgtactggattaccgggatgtcatcaac
acccgcaaaatgatcgcccgtcacgccgatgccggaacccaaacctgggtcagcacgccg
tcactaacacgtaactacctgcgtgataaatcgttttgccagcaaaacctgcccgcgctt
aaccaatttattttttgcggcgaagtgctgagcaaagagttggtgcaggcattgcagcac
gcgtttcccggctgccgcctcgttaatacctatggcccgaccgagtgtaccgtggcagtc
agcgcctgtgacatcacgccgtcaatgctggagcacgacgcaccactaccgctcggcaca
gcccggcctggcgtcacattgcgtatcgagggcgaagccgcacgcggtgaaatcatcatt
accggtgatgccgtcagcgcaggctatctcaatgccagcccggcacaacaggcgcgcttt
tttaccgatgccagcggcgtgcgcggttatcgcaccggtgatatcggatcgctgcgcgat
ggcctgctctattttcatggccgggaagacagcgagctgaaaattcagggttatcgcgtc
gttatcagcgatattgaaaatgcgctgcgcgcgcatccgctggtgcaggatgccatcgtc
accccctggctgctgcgcggtgttgctcagggactacaggcattcgtgctcgctgaccag
cctgatattttcccgcaattagccgactacctgcgccgctatttcccggtctatatggtg
ccgaaattctggtatccggtagaggaggcagcgcttaaccacaacagtaagctcgatcgc
ctgcgcgtgacagagcaggcaatcgacaagggcaaacgctatgttttcgtcagttcttga
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