Desulforapulum autotrophicum: HRM2_29120
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Entry
HRM2_29120 CDS
T00861
Symbol
patB
Name
(GenBank) PatB
KO
K14155
cysteine-S-conjugate beta-lyase [EC:
4.4.1.13
]
Organism
dat
Desulforapulum autotrophicum
Pathway
dat00270
Cysteine and methionine metabolism
dat00450
Selenocompound metabolism
dat01100
Metabolic pathways
dat01110
Biosynthesis of secondary metabolites
dat01230
Biosynthesis of amino acids
Brite
KEGG Orthology (KO) [BR:
dat00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
HRM2_29120 (patB)
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
HRM2_29120 (patB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
dat01007
]
HRM2_29120 (patB)
Enzymes [BR:
dat01000
]
4. Lyases
4.4 Carbon-sulfur lyases
4.4.1 Carbon-sulfur lyases (only sub-subclass identified to date)
4.4.1.13 cysteine-S-conjugate beta-lyase
HRM2_29120 (patB)
Amino acid related enzymes [BR:
dat01007
]
Aminotransferase (transaminase)
Class II
HRM2_29120 (patB)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Aminotran_1_2
Motif
Other DBs
NCBI-ProteinID:
ACN16000
UniProt:
C0QJX4
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All DBs
Position
3308832..3310037
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AA seq
401 aa
AA seq
DB search
MEINQEWNFDEIIDRSNTGSMKWEPGVLGVKFGKGREDLLPLWVADMDFKCPPAVVQAME
KRLAHQVYGYTMPDPGYNAALIAWYQRRHQWAIDNRWIMTSPGIVPATNYLIQRFSKPGD
KILIQTPVYYPFAQSIATNGRRIADNPLQIVDGRYQMDFEDLEEKAKDPRVKMAILCSPH
NPVGRVWTREELERFGKICIDNHVLIFADEIHCDLTMPGFQHTCFQGISQEFAQHSIAGN
SGSKTFNLAGLQQSSLIIPNDQLFSELSIYFETLGVGPRGGGTLFGAVATQAAYNGAEPW
LDDLLVYLHENFIYLKTQLEDQLPGVRVFDLEGTYLAWVDFRALGLSPETTILKIEQDAK
VALDHGNWFGENGAGFERVNIACPRSILKKAVDAMVAAFVQ
NT seq
1206 nt
NT seq
+upstream
nt +downstream
nt
atggaaatcaatcaggaatggaattttgatgaaatcattgacaggagcaataccggttcc
atgaaatgggagcccggggtcctgggggttaaatttggaaaaggcagggaagacctgctg
cccctgtgggtggcggatatggattttaaatgtccccctgccgtggtacaggccatggaa
aaacgcctggcccaccaggtgtacgggtataccatgcccgaccccggttacaatgccgca
ttgatcgcctggtatcagcgccgccaccaatgggcaatcgacaaccgctggatcatgacc
agtccaggtattgtcccggcaaccaattatctgatccagcgtttttccaagcccggtgac
aagattttgatccagaccccagtctattatccgtttgcccagtccattgccacaaacgga
cgacgtattgccgacaatcccctgcaaattgtggacggccggtatcagatggattttgaa
gatcttgaagaaaaagccaaagaccccagggtcaagatggccatcctctgcagcccccac
aaccccgtgggccgggtctggacccgggaggaacttgaacgctttggaaagatctgcatc
gacaaccatgtcctgatatttgccgatgaaatccattgtgacctaaccatgcccggattc
cagcatacctgttttcagggaatctcccaggaatttgcccagcattccattgccggcaat
tcaggcagcaagacctttaatctggcagggcttcagcagtcaagcctcatcattcccaat
gaccagcttttcagtgaactatcaatctattttgaaaccctgggtgtcggcccccggggc
ggaggcaccctgtttggggccgttgccacccaggcagcatacaacggtgcagaaccctgg
ctggatgatctgctggtttatctgcatgaaaatttcatctatctgaaaacacaacttgaa
gaccagctgcccggggtaagggtgtttgaccttgaaggcacctatctggcctgggtggat
ttcagggccctgggactgtcaccggaaacaaccatccttaaaattgaacaggatgccaag
gtggccctggatcatggcaactggtttggtgagaatggtgccgggtttgaacgggtgaac
attgcctgccccagatcaatcctgaaaaaagcggttgatgccatggtggcggcctttgtt
caataa
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