Dactylosporangium aurantiacum: Daura_07180
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Entry
Daura_07180 CDS
T08497
Symbol
ligA
Name
(GenBank) NAD-dependent DNA ligase LigA
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
daur
Dactylosporangium aurantiacum
Pathway
daur03030
DNA replication
daur03410
Base excision repair
daur03420
Nucleotide excision repair
daur03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
daur00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Daura_07180 (ligA)
03410 Base excision repair
Daura_07180 (ligA)
03420 Nucleotide excision repair
Daura_07180 (ligA)
03430 Mismatch repair
Daura_07180 (ligA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
daur03032
]
Daura_07180 (ligA)
03400 DNA repair and recombination proteins [BR:
daur03400
]
Daura_07180 (ligA)
Enzymes [BR:
daur01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
Daura_07180 (ligA)
DNA replication proteins [BR:
daur03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
Daura_07180 (ligA)
DNA repair and recombination proteins [BR:
daur03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
Daura_07180 (ligA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Daura_07180 (ligA)
MMR (mismatch excision repair)
DNA ligase
Daura_07180 (ligA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
Daura_07180 (ligA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_ligase_aden
OB_DNA_ligase
Nlig-Ia
HHH_2
BRCT
HHH_5
DNA_ligase_ZBD
HHH
PTCB-BRCT
BRCT_2
Zn_ribbon_TFIIB
Motif
Other DBs
NCBI-ProteinID:
UWZ55968
UniProt:
A0A9Q9IJI5
LinkDB
All DBs
Position
1623129..1625345
Genome browser
AA seq
738 aa
AA seq
DB search
MSDAGTEPTLEARERHAELARELDEHQYRYYILQSPAVDDSVYDRLMRELEAIEAEFPAL
VTPDSPSQRVGGTFSTDFAAVQHAERMLSLDNALDDDELAAWAQRTERDAGSQPRYLCEL
KIDGLAINLTYERGRLVRAATRGDGRTGEDVTLNVRTIADVPERLTGTDLPDLLEVRGEV
FFTLAGFEEVNAAQVAAGERPFANPRNAASGSLRQKDPRITASRPMRMLVHGFGAREGFN
PASQSEAYELMHAWGLPTSSRWQVFDDLAGVRSYIADYGDRRHTIEHEIDGVVVKVDQMS
IQRRLGSTSKAPRWAIAFKYPPEEAMTKLLSIEVNVGRTGRVTPFAVMEPVFVGGVTVEQ
ATLHNAQEVVRKGVLIGDTVVIRRAGEVIPEVLGPVADRRDGTEVPFVMPTHCPSCGTAL
APEKESDVDIRCPNARSCPAQLRERLFALASRSALDIEALGWKSAAALLGSVITNEAELF
DIDAKQLAKAPFFVNKDGSLSSTAHQLLANLQEVKQRPLWRVIVALSIRHVGPTAAQALA
NAIGSMETIAKATPEELAAVEGVGPTIARAVHDWFAVDWHREVVDRWAAAGVRMVEDQIA
SGPRPLDGITVVVTGSLERYSRDQATEAVTSRGGKVSGSVSKKTHFVVVGESPGSKADKA
ATLKVPILDEAAFEVLLTDGPDAARALVQPAAEPSAEPSAEASVEPSAGLAEGASAEPSA
AAFVEEPSAGEPAPEPAA
NT seq
2217 nt
NT seq
+upstream
nt +downstream
nt
atgagcgacgcagggaccgagcccaccctcgaagcacgtgagcggcacgccgagctggcc
cgcgagctggacgagcatcagtatcggtattacatcctgcagtcgccggccgtcgacgac
tcggtctatgaccggctcatgcgcgagctggaggcgatcgaggccgagttcccggcgctc
gtcacccccgactcgccgagccagcgcgtcggcggcacgttctccaccgacttcgccgcc
gtccagcacgccgagcgcatgctcagcctcgacaacgcgctcgacgacgacgagctggcc
gcctgggcccagcgcaccgagcgcgacgccggcagccagccgcgctacctgtgcgagctg
aagatcgacggcctcgccatcaacctcacctacgagcgcggccgcctggtccgcgccgcc
acccgcggcgacggccgcaccggcgaggacgtcacgctcaacgtgcgcaccatcgccgac
gtcccggagcgcctcaccggcaccgacctgcccgacctgctcgaggtccgcggcgaggtg
ttcttcaccctcgccggcttcgaggaggtcaacgccgcccaggtcgccgccggggagcgc
ccgttcgccaacccgcgcaacgccgccagcggcagcctgcgccagaaggacccgcgcatc
accgcgtcccgcccgatgcgcatgctcgtgcacggcttcggtgcccgcgaggggttcaac
ccggcgagccagtccgaggcctatgagctgatgcacgcctggggcctgccgacctcgtcg
cgctggcaggtcttcgacgacctcgccggcgtgcgctcctacatcgccgactacggcgac
cgccggcacaccatcgagcacgagatcgacggcgtcgtggtcaaggtcgaccagatgtcc
atccagcgccgcctcggctccaccagcaaggcaccccgctgggcgatcgcgttcaagtat
ccgcccgaggaggcgatgaccaagctgctcagcatcgaggtcaacgtcgggcgcaccggc
cgcgtcaccccgttcgccgtgatggagcccgtcttcgtcggcggtgtcaccgtcgagcag
gccaccctgcacaacgcgcaggaggtcgtccgcaagggcgtcctcatcggcgacacggtc
gtcatccgccgcgccggcgaggtcatccccgaggtcctcggcccggtcgccgaccggcgc
gacggcaccgaggtccccttcgtcatgccgacgcactgcccgtcctgcggcacggccctc
gctcccgagaaggagagcgacgtcgacatccgctgccccaacgcccgctcctgcccggcg
cagctgcgcgagcggctcttcgccctcgccagccgcagcgccctggacatcgaggcactc
ggctggaagtccgcggccgccctgctcggctccgtcatcaccaacgaggccgagctgttc
gacatcgacgccaagcagctcgccaaggccccgttcttcgtcaacaaggacggttcgctc
agcagcaccgcccaccagctgctcgccaacctccaggaggtcaagcagcgccctctctgg
cgggtcatcgtcgcgctgtccatccgccacgtcggcccgaccgccgcccaggccctggcc
aacgccatcggctcgatggagaccatcgccaaggccacccccgaggagctcgccgccgtc
gagggcgtcggccccacgatcgcccgcgccgtccacgactggttcgccgtcgactggcac
cgcgaggtcgtcgaccgctgggccgccgccggcgtgcgcatggtcgaggaccagatcgcc
tccggcccccgcccgctcgacggcatcacggtcgtcgtcaccggctccctcgagcgctac
tcccgcgaccaggccaccgaggccgtcacctcccgcggcggcaaggtctccggctccgtg
tcgaagaagacccacttcgtcgtggtgggcgagtccccgggctccaaggccgacaaggcg
gccaccctgaaggtcccgatcctcgacgaggccgccttcgaggtcctcctcaccgatggc
ccggacgccgcccgcgccctggtccagcccgccgcggagccgtccgcggagccgtccgcg
gaggcttcggtggagccgtccgcggggctggccgagggggcttcagcggagccgtccgcg
gcggctttcgtggaggagccttcggctggggagcctgcgccggagccggccgcctga
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