Desulfoglaeba alkanexedens: FDQ92_09945
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Entry
FDQ92_09945 CDS
T05964
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
dax
Desulfoglaeba alkanexedens
Pathway
dax00300
Lysine biosynthesis
dax00550
Peptidoglycan biosynthesis
dax01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
dax00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
FDQ92_09945
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
FDQ92_09945
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
dax01011
]
FDQ92_09945
Enzymes [BR:
dax01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
FDQ92_09945
Peptidoglycan biosynthesis and degradation proteins [BR:
dax01011
]
Precursor biosynthesis
Amino acid ligase
FDQ92_09945
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
ADH_zinc_N
LpxD
MeaB
ADH_zinc_N_2
SRP54
Motif
Other DBs
NCBI-ProteinID:
QCQ22454
UniProt:
A0A4P8L3U5
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All DBs
Position
2188448..2190007
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AA seq
519 aa
AA seq
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MTTERAGQPAASPLHELLAELEVFELSGNAAVAVKGLACDSRRVQPGDLFVALRGFRVDG
HRFVDQAIERGAAAVVVEEYRESFPEVTRVVVPDTRKALARLASAFFGHPGCSLHLIGVT
GTNGKTTTTLLLESILREAGHRVGVLGTLAYRWGAEVRKAAMTTPESLEIQKYLAAMRDD
GMTHVVMEVSSHALALSRVEGCPFRVGVFTNLSQDHLDFHENMEAYFQAKTCLFTRCPAR
APAPPVAVINVDDPYGRRLAGMVPGPPVTFSIEDPGAEIHAENVTLSASGIHMTVRTPVG
RLDLRSALLGRLNASNILAAVGAGVALGMPTDALVRGIEGVRGVDGRLQRLATAGGFDVV
VDYAHTPDAMEKALACLRELTRGRLWAVFGCGGDRDRIKRPLMGRVAARLADLVVLTSDN
PRSEDPAAILREIEPGVEAEGLSRFEPRDLPVSDRGYTVIADRREAIEYVLSRALAGDLV
FVGGKGHETYQIVGDMILDFDDRRVVAEFFRPARAAADD
NT seq
1560 nt
NT seq
+upstream
nt +downstream
nt
atgactacagaacgggcgggacaacccgcggccagccccctccacgaacttctggccgaa
ctcgaagtctttgagctttcggggaatgcagcggtggccgtcaagggattggcctgcgac
agccgccgggttcagccgggagaccttttcgtggcgctccggggttttcgcgtggacggg
caccggttcgtggatcaggccatagaacggggcgcggcggcggttgtcgtggaagaatat
cgcgaatcgtttcccgaggtaacgcgggtggtggtccccgataccagaaaggccttggcc
cggctggcttcggcgtttttcgggcaccccggctgctcgctccatctcatcggcgtgacg
ggaaccaatggaaagaccacgacgacgctcctcctggaaagcatcctgcgggaggcgggc
caccgagtgggggttttagggactctggcctatcgctggggtgccgaggttcgaaaggcc
gccatgaccactccggagtctctggaaatccagaaataccttgcagccatgcgggacgac
ggaatgacccacgtggtgatggaggtctcttctcacgctctggcgctgagccgcgtggaa
ggttgcccgttccgggtgggggtgttcaccaatctgagccaggatcatctcgattttcat
gaaaatatggaagcctatttccaggccaagacgtgccttttcacccggtgcccggcccga
gcccccgctccccccgttgcggtgatcaacgtggacgacccttacggcaggcgcctggcg
ggcatggtgccgggccccccggtcaccttttccatcgaagaccccggagcggaaatccac
gcggagaacgtgaccctgagtgcctccggcatccacatgacggtccgcacgcccgtcggc
cggctggacctgcggtccgcccttctggggcggctcaacgcgtccaacatcctggccgcc
gtcggcgccggggtggctttgggcatgccgactgatgccctcgtccggggaatcgaaggg
gtccggggcgtggacgggcggctgcagcgcctcgccacggcaggcgggtttgatgtggtg
gtggattacgcccacaccccggacgccatggagaaggcgcttgcgtgccttcgggagttg
acccgggggcgcctctgggcggttttcggctgcggcggagatcgagaccgcatcaagcgt
cccctgatgggccgtgtcgccgctcgccttgcggatctggtggtgctcaccagcgacaat
ccccgaagcgaggacccggcggccatcttgcgggagatcgaacccggggttgaagcggaa
gggctttcccgcttcgaacctcgggaccttcccgtttcggatcgcggatacacggtgatt
gccgatcgtagggaagccatcgaatacgtgctgtcgcgggcgcttgcgggcgatctggtt
tttgtggggggcaaaggccacgaaacctaccagatcgtgggcgacatgatcctcgatttc
gacgaccgtcgggtggtggcggagttcttccggccggcccgggcggcggccgatgactga
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