Desulfotomaculum nigrificans: Desca_0413
Help
Entry
Desca_0413 CDS
T01498
Name
(GenBank) efflux transporter, RND family, MFP subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
dca
Desulfotomaculum nigrificans
Pathway
dca01501
beta-Lactam resistance
dca01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
dca00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
Desca_0413
01503 Cationic antimicrobial peptide (CAMP) resistance
Desca_0413
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
dca03036
]
Desca_0413
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
dca02000
]
Desca_0413
01504 Antimicrobial resistance genes [BR:
dca01504
]
Desca_0413
Chromosome and associated proteins [BR:
dca03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
Desca_0413
Transporters [BR:
dca02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
Desca_0413
Antimicrobial resistance genes [BR:
dca01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
Desca_0413
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HlyD_D23
HlyD_3
Biotin_lipoyl_2
OEP
Biotin_lipoyl
NQRA_N
PYNP_C
TPR_MLP1_2
PTS_EIIA_1
DUF7432
Motif
Other DBs
NCBI-ProteinID:
AEF93308
UniProt:
F6B6Y3
LinkDB
All DBs
Position
complement(434868..435998)
Genome browser
AA seq
376 aa
AA seq
DB search
MKRVAGLSILLFLLVFSLVGCGAKPQQAEEKLVPVETTKAVRTNLTHILGTTGEIQAASD
VAVAPKISGRVAAVHVKVGDHVSKGQVLFTLEATDLSNALRQAEAALAVNQANLEKAQRA
LTDAQLNYDRSKTLFDAQAISKVEFEQAESGLISAQAGLKMAQAQLQQSQVAISTARDNL
SNATVTSPISGVVAAVNIDVGEMASPQVTSVTVVQLDSTKVKVNVSENVIDSIKTGTGVP
VTIDALNKTITGTILSVSPKADPTTHAFAVEIELPNKQGEIKAGMVARLNLSTGTSQGVL
AVPTDAVIERDGQYTLFLLENGRAKEVSVKVGVTSGDLTEIKAGLKEGQTVIVKGNRLVA
DGQKVKVVKELGGAAK
NT seq
1131 nt
NT seq
+upstream
nt +downstream
nt
ttgaaacgcgtagcaggcttatcaattttgctatttttacttgtattttctctggttggt
tgcggagcaaaaccacaacaagcggaagaaaaactggtacccgtggaaaccactaaagcc
gtacggaccaatttaacgcacatcctgggcaccaccggagaaattcaggcggcgtccgat
gtggccgtggcccccaaaatttccggacgggtggcagctgttcatgttaaggtaggagac
catgtaagcaagggacaagtcttgtttacattagaagctactgatttaagtaatgcactg
cggcaggcggaggcagctttagctgtaaatcaggccaatttggagaaggcccaaagggcg
ttaactgacgctcaactaaattatgatcgcagtaagacgctgtttgatgcccaggccatt
tctaaagttgaatttgaacaggcagagagcggtttaatttcagctcaggccggtttaaaa
atggcccaggcccaacttcagcagtcccaggtagccataagcactgcccgggataattta
agtaacgccactgttacttcgcccatttccggagtggtggccgccgttaatattgatgtg
ggagaaatggccagcccccaagtgacatctgtaacggtggtacaactggacagcaccaag
gttaaagtaaatgtatctgagaacgtcattgactccatcaaaaccggcaccggggtaccg
gtgaccattgatgccttaaacaaaactattactggcactatactttcggtgtcccccaaa
gcagaccccaccacccatgcctttgctgtggaaattgaactgccaaacaagcaaggggaa
ataaaagccggtatggtagcccgattaaacctgtccaccggtacctcccaaggggtgttg
gccgtacccactgacgcggtgatcgaacgagacgggcaatacaccttgtttttgctggaa
aacggtagggctaaagaagtctcggttaaagtgggtgtaacttccggtgacctaactgaa
ataaaagccggacttaaggaaggacaaaccgtgatagttaagggcaaccgcctggtggct
gacgggcaaaaagttaaagtggtgaaagaattggggggtgcagctaaatga
DBGET
integrated database retrieval system
