Desulfotomaculum nigrificans: Desca_1348
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Entry
Desca_1348 CDS
T01498
Name
(GenBank) Radical SAM domain protein
KO
K10026
7-carboxy-7-deazaguanine synthase [EC:
4.3.99.3
]
Organism
dca
Desulfotomaculum nigrificans
Pathway
dca00790
Folate biosynthesis
dca01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
dca00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00790 Folate biosynthesis
Desca_1348
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
dca03016
]
Desca_1348
Enzymes [BR:
dca01000
]
4. Lyases
4.3 Carbon-nitrogen lyases
4.3.99 Other carbon-nitrogen lyases
4.3.99.3 7-carboxy-7-deazaguanine synthase
Desca_1348
Transfer RNA biogenesis [BR:
dca03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
Desca_1348
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
Fer4_12
Motif
Other DBs
NCBI-ProteinID:
AEF94207
UniProt:
F6B586
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All DBs
Position
1471476..1472219
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AA seq
247 aa
AA seq
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MPVAYLQEIFSSVQGEGPYVGCRQVFIRFAGCNWCCAYCDTPTEPQPATCVVEKSPGYRD
FVNLANPMTPGQVAEIIRQYYNLSWHHSVSLTGGEPLLHTEYIKDLIKHLPSTRRGIFLE
TNGTLPDRLTEVITGIDIISMDVKLSSATGTPTPWDLHRHFIKVARQRELYVKIVVTAET
KVEELQKAGELLQELAPQAVLVLQPVTPNCGVIAPPVSRVLYLQEQALKIIKNVRIIPQT
HLMMGQL
NT seq
744 nt
NT seq
+upstream
nt +downstream
nt
gtgccggttgcatacctgcaagaaatattctcttcggtgcagggggaaggaccctatgtt
ggttgtcggcaagtgtttatccgttttgctggctgtaactggtgctgtgcctattgtgat
acccccactgagccacagcctgccacctgtgtagtggaaaagtcccccggttaccgggat
tttgtcaacttagccaaccccatgacaccgggccaggtggccgaaataattaggcaatat
tataatttatcctggcatcattcagtaagcctgaccggtggggaacctttgttacatact
gagtatattaaggatttaattaagcatttacccagcacccggcgaggaatttttttggag
accaacggtaccttgccggaccggctgactgaggtcattaccggtattgatataattagc
atggatgttaaactatccagtgctaccggcacccctacgccctgggatttacaccgacat
tttataaaagttgccaggcagcgtgaactatatgtaaaaatcgtggtaactgcagaaact
aaggtggaagaattgcaaaaagcgggggaactgctgcaggaactggctccccaggcagtt
ttagtcttgcaacctgtgacacctaactgcggcgtaattgcgccaccggtgtccagggta
ctgtacctacaggaacaagcccttaaaataataaaaaacgttaggattattccgcaaacc
catctaatgatgggtcaattatag
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