Desulfotomaculum nigrificans: Desca_1927
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Entry
Desca_1927 CDS
T01498
Name
(GenBank) 4-hydroxy-2-oxovalerate aldolase
KO
K18365
4-hydroxy-2-oxovalerate/4-hydroxy-2-oxohexanoate aldolase [EC:
4.1.3.39
4.1.3.43
]
Organism
dca
Desulfotomaculum nigrificans
Pathway
dca00362
Benzoate degradation
dca00621
Dioxin degradation
dca00622
Xylene degradation
dca00984
Steroid degradation
dca01100
Metabolic pathways
dca01120
Microbial metabolism in diverse environments
dca01220
Degradation of aromatic compounds
Brite
KEGG Orthology (KO) [BR:
dca00001
]
09100 Metabolism
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
Desca_1927
00622 Xylene degradation
Desca_1927
00621 Dioxin degradation
Desca_1927
00984 Steroid degradation
Desca_1927
Enzymes [BR:
dca01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.3 Oxo-acid-lyases
4.1.3.39 4-hydroxy-2-oxovalerate aldolase
Desca_1927
4.1.3.43 4-hydroxy-2-oxohexanoate aldolase
Desca_1927
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Gene cluster
GFIT
Motif
Pfam:
HMGL-like
DmpG_comm
His_biosynth
ThiG
ComA
VCD
Motif
Other DBs
NCBI-ProteinID:
AEF94769
UniProt:
F6B8S6
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All DBs
Position
complement(2045036..2046052)
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AA seq
338 aa
AA seq
DB search
MSNAKHIHLVDTTLRDGSHAISHQYTAEQIATIAAGLDQAGVEFIEVSHGDGLAGSSINY
GRSAISEEEMLKAASSVIKNATLTVLLIPGIGTQEDLEMAINCGAKAVRVATHVTEADIS
QQHIAMAKKMGLKAIGFLMLSHMVEPDKVVEQAKLFESYGADVVYVADSAGAMLPEDVKA
RISAVVDAVNVPVGFHAHNNLTLATANSLAAIEAGATYIDGTCRGLGAGAGNCQIEALVG
VLDKKGYHTGIDLYKIMDVAEDLVEPIMHRPQVVRNAPFMLGYAGVYGSFLLHAYRAAEK
FNLDPRDILVELGKRKMVGGQEDMIIDVAYQLSKKRGA
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
atgagtaacgcaaaacacatccacttagtcgatacaactctacgggacggcagccatgcc
atcagtcaccagtacacggcagagcaaattgccaccattgctgccggtttggatcaggcc
ggagtggaatttatcgaagtatctcacggagacggtttagccggctcgtcaattaactac
ggcagatctgccattagcgaagaggaaatgcttaaggctgccagcagtgtgattaagaat
gctaccctaactgttttgcttatcccgggtatcggaacccaggaagatctggaaatggct
attaactgtggagccaaagccgtacgggtggcaactcatgttaccgaggcagatatttcc
cagcagcatatcgccatggctaagaaaatgggcttaaaggcaattggctttttaatgctt
tcccacatggtagaaccagataaagtggtggagcaagctaaattatttgagtcctacggg
gcagacgtcgtatatgtagctgactctgccggagccatgctgccggaggatgtcaaggca
cggattagcgctgtggttgatgctgtcaacgtacccgttggtttccacgcccataataac
ctgaccctggccaccgccaattcactggctgccattgaggccggcgctacctacattgat
ggaacctgccgcggtctcggtgccggggccggtaactgccagattgaagcgctggttggc
gtgctggataaaaaaggttaccatacaggaatagatctttacaagattatggatgtggcg
gaagatctcgttgaacccattatgcaccgcccccaagtagttcgtaatgcaccttttatg
ctgggttatgccggtgtttacggtagtttcttactacatgcttaccgggctgccgagaaa
tttaacctggatccaagggatatactggtggaactgggtaaaagaaaaatggttggcggt
caggaagacatgattattgatgtcgcttaccaactatctaagaaaagaggtgcttaa
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