Solidesulfovibrio carbinolicus: C3Y92_13040
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Entry
C3Y92_13040 CDS
T06503
Name
(GenBank) hydrophobe/amphiphile efflux-1 family RND transporter
KO
K18138
multidrug efflux pump
Organism
dcb
Solidesulfovibrio carbinolicus
Pathway
dcb01501
beta-Lactam resistance
dcb01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
dcb00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
C3Y92_13040
01503 Cationic antimicrobial peptide (CAMP) resistance
C3Y92_13040
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
dcb02000
]
C3Y92_13040
01504 Antimicrobial resistance genes [BR:
dcb01504
]
C3Y92_13040
Transporters [BR:
dcb02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
C3Y92_13040
Antimicrobial resistance genes [BR:
dcb01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
C3Y92_13040
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
SecD_SecF_C
Patched
EMC3_TMCO1
Motif
Other DBs
NCBI-ProteinID:
QAZ68100
UniProt:
A0A4P6HPS4
LinkDB
All DBs
Position
2970790..2973939
Genome browser
AA seq
1049 aa
AA seq
DB search
MISRFFLGRPVFSIVISLVIVLAGLAAIRSLPIAQYPDIVPPEVNVTAVYPGASPEVIAA
TVAAPLEQQINGVDNMLYMRSTSSGDGTLSITVTFAVGTNPDQNTINVNNRVQAAQTTLP
EEVRRQGVTVTKKSSNILQIIGFDSPTGRYDSVFISNYVLVNVLDELKRLPGVGDASIFG
AKDYSMRVWLRPDKLAQLKLTPADVAAAISEQNAQFAAGRIGAEPTKPESPVALNYMVTT
KGRLLTPEEFGDIILRAQPDGSLLRLKDVARVELGAKDYSSISKRNGSPTVNIGIFLAPG
ANALDTAERVTSKLKELSTRFPDGIIYSVPLDTTTFVRVSIEEVIHTLVEAMILVFLVVY
LFLQNFRATLIPCLAVPVSIIGTFAGMQALGFTINTLTLFGMVLAIGIVVDDAIVVLENV
ERIMTKEKLPPREATAKAMEEVTGPVVAIVLVLCAVFVPVAFLGGLTGQMYKQFAITIAV
SVVISGLVALTLTPALCASLLKPGHQEPNRFFRGFNRLFDAITAGYGAGVAFLLRRSAFA
MLLFAGLCLGTGWLFKQVPGGLVPDEDQGYVIAVNILPDGTSLRATEGIADAMDAMNMQD
PSVKDVIAITGLDLLSFTYRSNYGTIFMPLKPWKERPGEELSSFAVVKRIFGRGMALPKS
FTLAFNPPAISGMSNTGGFEAYLQSRGEGDVKALAAMTEALVAEASKNPVLGRVATTFGA
NVPQLRIDLDREKAKALGVAVSDVYAAMQATFGAYYVNDFNKFGRTFKVQIQSEADFRDR
PEDLRDVFVRSSKGEMIPLTALATIEKSTGPEVMERFNVFPAAKIMGQPAPGHTSGEALA
AMEQAAAKVLPPEYTLAWTGSAYQEKAAQGSSALVFAMGIVMVILILAAQYERWTLPFAV
VMAVPFALFGAIAAVYGRDLSNDIYFQIALVTLIGLAAKNAILIVEFAVLEVKAGKALAE
AALSAAKLRFRPIIMTSLAFILGCLPLAVSTGAGANSRHAIGTGVIGGMLGATIIAPFFI
PVFFKLIMGLGAWVQQITGKHVAKEQKAD
NT seq
3150 nt
NT seq
+upstream
nt +downstream
nt
atgatttcacgctttttcctgggccgaccggtattttccatcgtcatctcgctggtcatc
gtgctggcgggtctggcggccatcagaagtctgcccatcgcccagtacccggacatcgtg
ccgcccgaggtcaacgtcacggccgtctaccccggggccagccccgaggtcatcgccgcc
accgtggccgcgccactggagcagcagataaacggcgtcgacaacatgctctacatgcgc
tcgacgagctccggcgacggcaccctgtccatcaccgtcacctttgccgtgggcaccaat
cccgaccagaatacgatcaacgtcaacaaccgcgtccaggcggcccagaccaccctgccc
gaggaagtccgccgccagggcgtgaccgtcaccaagaaatcctccaacatcctccagatc
atcggcttcgactcgccaaccggccgctacgactcggtttttatcagcaactacgtgctg
gtcaacgtccttgacgaattaaagcgcctgcccggcgtcggcgacgcctccatcttcggg
gccaaggactattccatgcgcgtctggctgcggccggacaagctggcccagctcaagctc
acccccgccgacgtggccgccgccatcagcgagcaaaacgcccagttcgcggccggccgt
atcggagccgagcccaccaagcccgaaagtccggtggcgctcaattacatggtcaccacc
aagggccggcttttaacccccgaggaattcggcgacatcatcctgcgcgcccagcccgac
gggtcgcttttgcgcctgaaggacgtggcccgggtggaactcggggccaaggactacagc
tcgatttccaagcgcaacggcagccccaccgtcaacatcggcatcttcctggctcccgga
gccaacgccctggacacagccgaacgcgtcacgagcaagctcaaggaactctcgacccgc
ttccccgacggcatcatctattcggtgcccctggacaccaccacctttgtgcgcgtttcc
atcgaggaggtcatccacaccctggtcgaggccatgatcctggtctttctcgtggtctac
ctcttcctgcaaaacttccgggccacgcttatcccctgcctggccgtgccggtctccatc
attggcaccttcgccggcatgcaggccctgggcttcaccatcaacaccctgaccctgttc
ggcatggtcctggccatcggcatcgtcgtggatgacgccatcgtggtgctcgaaaacgtc
gagcgcatcatgaccaaggagaagctgccgcccagggaagccacggccaaggccatggaa
gaggtgaccgggccggtggtggccatcgtgctggtgctgtgcgccgtgttcgtgccggtg
gcgtttttgggcggcttgaccggccagatgtacaagcagttcgccatcaccatcgccgtg
tccgtggtcatctcgggcctggtggccctgaccctgaccccggccttgtgcgcctcgctg
ttaaaacccggccaccaggaacccaatcggtttttccggggctttaaccgcctgtttgac
gccatcaccgccggctacggcgcgggcgtggcctttctgctgcgtcgcagcgcctttgcc
atgctccttttcgccggcctgtgcctgggcacgggctggctgttcaagcaggtgcccggc
gggctcgtcccggacgaggaccagggctatgtcatcgccgttaacatcctgcccgacggc
acgtcgctgcgggccaccgaaggcatcgccgacgccatggacgcgatgaacatgcaggac
ccctcggtcaaggacgtcatcgccatcaccggcctcgatctcttgagcttcacctaccgc
tccaactacggcaccatcttcatgccgcttaagccctggaaggagcgccccggcgaggag
ttgtcctcgtttgccgtggtcaagcgcatcttcggccggggcatggccctgcccaaaagc
ttcaccctggccttcaatccgccggccatttccggcatgtccaacaccggtggcttcgaa
gcctacctgcaaagccggggcgaaggcgacgtcaaggccctggccgccatgaccgaagcc
ctggtggccgaagcctccaagaacccggtgctgggccgggtggccaccaccttcggggcc
aacgtgccccagctgcgcatcgaccttgaccgcgaaaaggccaaggccctgggcgtggcc
gtcagcgacgtctatgccgccatgcaggccacattcggcgcgtattacgtcaacgacttc
aacaagttcggccggaccttcaaggtccagatccagtccgaggccgacttccgcgaccgg
cccgaggacctgcgcgacgtgttcgtgcgttccagcaaaggcgagatgatccccttgacc
gccctggccacaatcgaaaagtccaccggccccgaggtcatggaacgcttcaacgtcttc
ccggccgccaagatcatgggccagcccgccccgggccacacctcgggcgaggccctggcc
gccatggagcaggccgcggccaaggtgctgccgccggaatacaccctggcctggaccggc
tcggcctatcaggaaaaggccgcccagggctcctcggccctggtcttcgccatgggcatc
gtcatggtcatcctgatcctggccgcccagtacgaacgctggaccctgccctttgccgtg
gtcatggccgtgccgtttgccctatttggggccatcgccgccgtctatggccgggacctg
agcaacgacatctacttccagatcgccctggtgacgcttattggcctggccgcgaaaaat
gccatcctcatcgtggaattcgcggtgctggaggtcaaggccggcaaggccctggccgag
gcggcgctgtcggcggccaagctgcgctttcggcccatcatcatgacctcgctggccttt
atcctcggctgcctgcccctggccgtgtccacgggcgcaggcgccaacagccgccacgcc
atcggcaccggcgtcatcggcggcatgctcggggcgaccatcatcgcgccgtttttcatc
ccggtctttttcaagctcatcatggggcttggggcctgggtgcaacaaataaccgggaaa
catgttgccaaggagcaaaaagcagactaa
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