KEGG   Dermochelys coriacea (leatherback sea turtle): 119842911
Entry
119842911         CDS       T09064                                 
Name
(RefSeq) TNF receptor-associated factor 2-like isoform X1
  KO
K03173  TNF receptor-associated factor 2 [EC:2.3.2.27]
Organism
dcc  Dermochelys coriacea (leatherback sea turtle)
Pathway
dcc04010  MAPK signaling pathway
dcc04137  Mitophagy - animal
dcc04141  Protein processing in endoplasmic reticulum
dcc04210  Apoptosis
dcc04217  Necroptosis
dcc04621  NOD-like receptor signaling pathway
dcc04622  RIG-I-like receptor signaling pathway
dcc04920  Adipocytokine signaling pathway
dcc05132  Salmonella infection
dcc05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:dcc00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    119842911
 09130 Environmental Information Processing
  09132 Signal transduction
   04010 MAPK signaling pathway
    119842911
 09140 Cellular Processes
  09141 Transport and catabolism
   04137 Mitophagy - animal
    119842911
  09143 Cell growth and death
   04210 Apoptosis
    119842911
   04217 Necroptosis
    119842911
 09150 Organismal Systems
  09151 Immune system
   04621 NOD-like receptor signaling pathway
    119842911
   04622 RIG-I-like receptor signaling pathway
    119842911
  09152 Endocrine system
   04920 Adipocytokine signaling pathway
    119842911
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    119842911
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    119842911
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:dcc03019]
    119842911
   04121 Ubiquitin system [BR:dcc04121]
    119842911
Enzymes [BR:dcc01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     119842911
Messenger RNA biogenesis [BR:dcc03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Stress granule specific factors
     119842911
Ubiquitin system [BR:dcc04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   TRAF proteins
    119842911
SSDB
Motif
Pfam: TRAF-mep_MATH TRAF3_RING zf-C3HC4_4 zf-C3HC4 zf-RING_5 zf-C3HC4_2 zf-RING_UBOX zf-RING_2
Other DBs
NCBI-GeneID: 119842911
NCBI-ProteinID: XP_038227621
LinkDB
Position
14:38705148..38710964
AA seq 403 aa
MSPIASAQPPIPGGTMVKFGAGLRPVDPARGSGLLCSACGFLLIRPQQTECGHRYCTACV
QRLLGDTDKVTCCVCSKRLSPDQFHKDRAAEKDALGTAVTCPRASCSWTGTLASYLEHLC
PPATSPGPEEKSAPKDLEVHMMTGVPRGGRYSQMVSHKAATRCAGERRSPGSQMWRGEDH
DAPSLDLQRRIEQLEVMVTSLRRELRSQASAMQAGQRRCLQDQPTPGISAEPTGCSHGAR
GAAATSSELASADGTLVWKLQGFSRLLGDAKAGRRTSIYSSVFATHPFGYRLCLRLYPDG
DGAGQGTHLSLFMALAKGPYDDLLPWPFLRKVTFYLLDPWRKRPALREAFAPDPLSTSFQ
QPQGQLNVASGSPLFAPHGQLQNYLKDDTLYIKVVVDTSGMGV
NT seq 1212 nt   +upstreamnt  +downstreamnt
atgtctcccatcgccagcgcccagccgcccatcccaggggggaccatggtgaagttcggg
gcaggcctcaggcctgtggatcctgcccggggctccggcttgctctgctcggcttgtggc
ttcctgctcatccggccccagcagacagagtgcggccatcggtactgcacagcctgcgtc
cagcgcctgctgggggacacagacaaggtgacctgctgcgtttgcagcaagagactgagc
cccgaccagtttcacaaggaccgagcggccgagaaagacgctctcggcacggccgtgacc
tgccccagagccagctgcagctggacggggaccctggcgtcctacctggagcacctctgc
cccccagcgacgagtcctggcccagaggagaaatcagctccgaaggacctggaggtccac
atgatgacaggtgtcccccgggggggcaggtactcccagatggtgagtcacaaggcagcc
accagatgtgcaggggaaagaagaagtcctggtagccagatgtggagaggcgaagatcat
gatgccccgtccctggatctccagcggaggatagagcagctggaggttatggtgacctcc
ctgcgccgggagctccggagccaggccagtgccatgcaagctggccagcgccggtgcctc
caggaccagccgaccccggggatctctgcggagccgactggctgctcccacggggctcgg
ggagctgcagctacgtcctcggagctggccagcgccgacgggaccctggtgtggaagctc
caggggttctccaggctgctgggggacgccaaggccgggaggagaacgtccatctattcc
tcggtcttcgccacccaccccttcggctaccggctctgcctccggctctacccggacggg
gatggggccggccaggggactcacctgtcactgttcatggccttggccaaggggccctac
gacgatctcctgccttggcctttcctccgcaaggtcaccttctacctcctggatccctgg
cggaagaggccagccctgagggaggctttcgcccctgaccccctcagcacgtccttccag
cagccccagggccagctcaatgtggctagcgggagccccctctttgccccccacggacaa
ctccaaaactacctcaaagacgacaccctctacatcaaggtggtggtggacacgtccggg
atgggggtgtga

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