Dermochelys coriacea (leatherback sea turtle): 119848890
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Entry
119848890 CDS
T09064
Symbol
BRCA1
Name
(RefSeq) breast cancer type 1 susceptibility protein isoform X1
KO
K10605
breast cancer type 1 susceptibility protein [EC:
2.3.2.27
]
Organism
dcc
Dermochelys coriacea (leatherback sea turtle)
Pathway
dcc03440
Homologous recombination
dcc03460
Fanconi anemia pathway
dcc04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
dcc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
119848890 (BRCA1)
09124 Replication and repair
03440 Homologous recombination
119848890 (BRCA1)
03460 Fanconi anemia pathway
119848890 (BRCA1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
dcc01009
]
119848890 (BRCA1)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
dcc04121
]
119848890 (BRCA1)
03036 Chromosome and associated proteins [BR:
dcc03036
]
119848890 (BRCA1)
03400 DNA repair and recombination proteins [BR:
dcc03400
]
119848890 (BRCA1)
Enzymes [BR:
dcc01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
119848890 (BRCA1)
Protein phosphatases and associated proteins [BR:
dcc01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
119848890 (BRCA1)
Ubiquitin system [BR:
dcc04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
119848890 (BRCA1)
Multi subunit type E3
BRCC complex
119848890 (BRCA1)
Chromosome and associated proteins [BR:
dcc03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
119848890 (BRCA1)
DNA repair and recombination proteins [BR:
dcc03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-core complex
119848890 (BRCA1)
BRCA1-A complex
119848890 (BRCA1)
BRCA1-B complex
119848890 (BRCA1)
BRCA1-C complex
119848890 (BRCA1)
BRCA complex
119848890 (BRCA1)
FA (Fanconi anemia) pathway
Downstream FA components
119848890 (BRCA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCT_assoc
BRCT
zf-C3HC4
zf-C3HC4_4
zf-RING_UBOX
zf-C3HC4_2
zf-RING_2
BRCT_2
zf-RING_5
zf-C3HC4_3
RING_XB3-XBAT31
zf-Nse
zf-RING_6
zf-RING_10
zf-MIZ
zf-ANAPC11
U-box
Prok-RING_4
zf-RING_4
Motif
Other DBs
NCBI-GeneID:
119848890
NCBI-ProteinID:
XP_038241155
LinkDB
All DBs
Position
27:complement(15721529..15772260)
Genome browser
AA seq
1891 aa
AA seq
DB search
MDSSVAAIGDVQSVLLAMQKNLECPICLELIKEPVSTKCDHIFCRFCMFKLLSKKKKGPA
QCPLCKTEVTKRSLQENPRFKQLIEGLLETIRAFELDTGIKFLNSQDFSKNPVETNSTEL
LWKEGSIIQSKGYRNRQKRIKEQEQENPTLEANAGAQVADNMVRRSSLRNKRQKCESGKA
VYIEFGSDSSEDLFKKAGGCGMGDTELFQTPPQKGEREEELKYAEKESESPCNMWPSMSD
AGEILSSDILGECDVSEEDSKDTWNGIEDFEAAQVNVAEGHLKESQSISASHSQAEQCDR
TANASSLLNEDTNLFHSAEEMYAGETPFSSENKESGLAHSSENQLDKSKKTGNSVQHTEA
VETCQPESNSLHEREPASESLLQPKTLHGNPLSQVSGKRLKRSIQKVNEWFSKSNEMLSS
GSSQDAPAGAADTEDGNSDLSDKESCISEKTDLMVNCTEVVVGCENDRSLSKSTVHNIED
KIFGKTYKRERKSTPLAHTREMPLSPKVEDVTTDVKSSSNSRTSKLKRKRKTASDLQPAD
FIKKRDEKDLKKHSEGVNQCIVGRNARRKKGGEGSTVVNGSPMGVKNDTEKVTCNSTDGK
PAQDTCDRKNTKKMRSSLTKRSKHSARPVCALQLVVDRNSSCPDQTELQIDSYPSSEEPK
KVDSENKRVRRSRRLQLLTEKMTKETRRRSEPNERARKHASESKNSSSGLHVNVLVHVPE
CKDPDEQQDVLNHSIPLSDTELKGNALEVDKTPPNPENCSDGMQTGKGLLYAEILVEDLN
ACSVVPDTDSQDNENQGSHSLLQPHSTNVDQAACLVQNLSENNQCAAVELKNRELCACSP
KTNRHFPENDLERFRNPKSHEAKIISELNTETEDSELETQYLRNMFRHSKRLSFTLHPSP
VKESVIESTASETLRKSGASCVEYRHNNRDLKSEPPYVKKTVGLDEVCEREEPKTCESAK
GISGRSPGTHFSRDTERGHVSDYGKNISQVPDQVQLFSPPRAATAKIKIKSRSRSRLQKR
RQPKEKRISPEMMIESQLSQNLNKSNGSLGDQSNIEERISQRTDLSTINETGSNQGVKAE
EAENKGPVLNLQPKPMLVHPVVCRPSPAEFSCKVIEKNGYEGECKQVKSDKEQVSQIASI
GVPECLISGEALEQPTEGTSGFPLLSETPDILLCTAGDIKENISICEIDKREISAVFVKT
GERASLRELDSGSSSSKSRSQNFVREPRRPAWKLQSSEEDSSEDEELPCFQALIFGKLVS
TPLQSTGQIMSIVESSSPEEILALLNSSSGNNKAVQKTPGVLLRDACVSPSQESECSLNL
FSSQSNMSEDSTNRLQELKKPITLAPCSKEMSSFSGSREASPNGNEELTGRKTDLEDGHQ
RDQNVQPNLGEASGYDSEASHQGDSSGLSSQGEILTTQQKDAMQNNLKELQQEMAVLEAV
LEEHGSQGFEFPTPQSELPPSRVEGALTVGQMRPARGTALISEVNLENHKISSSKGLSAD
GFHVMPSDHSNTKNKELEEEGLRSPALQLSRPKSHLLKKEALEQGHWCPRLWKAKTHSQE
GTFQRVGVAVLLEKEAMKQRNQYGIESENAAEQEFGTKLNSAAVPCGNESRTPNGSPLKF
SERLTHCQTAESRNSAAISWNANNGKSTQGCKQERRAFSYASALHTGVVKENAKSPVVTC
RRQMSIVASGLNQRELLLVQKFARKTQSTLSNQITEGTTHVIMKTDMELVCERTLKYFLG
IAGRKWVVSYEWIVQSFKEGKILDEYDFEVRGDVINGRNHQGPKRARRSQTGKLFKDIEI
CCYGPFTDMRTGDLEWMVELCGASVVKQPHLFTHKANSTAVIVVQPDAWLEYAGYRVIQQ
KCTAMVTREWVLDSVACYECQEFDTYLVSQS
NT seq
5676 nt
NT seq
+upstream
nt +downstream
nt
atggactcgtctgtggctgccattggagatgtgcaaagtgtacttttggctatgcagaag
aacttggagtgcccaatatgtttggagttgataaaagagccagtctcaacaaaatgtgac
catatattctgcagattctgtatgtttaaacttctcagcaaaaagaaaaaaggcccagca
cagtgtccactgtgtaagactgaggttaccaaaagaagtcttcaggaaaatccaagattt
aaacagctaattgaagggctactggaaactatccgtgcttttgaacttgacactggaatc
aagtttttaaacagtcaggatttttctaaaaaccctgtcgaaaccaattctactgagctc
ttgtggaaggaaggttccatcatccaaagtaaaggctatagaaacagacaaaaaagaatt
aaagaacaagagcaagaaaatcctaccttggaagctaatgctggtgcccaggttgcagac
aacatggtcaggaggagttccctcagaaacaaaaggcagaaatgtgaatctggtaaagca
gtgtacatcgaatttggatctgattcttctgaagatctttttaaaaaagcaggtggttgt
ggaatgggggacacagaattatttcagactccacctcagaaaggagagcgtgaggaagaa
ctaaagtatgctgagaaggaaagtgaaagtccatgcaacatgtggcctagcatgtcagat
gcaggagaaatactctcatcggatatcttaggtgaatgtgatgtctcagaggaagacagc
aaagacacttggaatggcatcgaagattttgaggctgctcaagtgaatgtggctgagggt
catttaaaagagagccagagcatttctgcttcacactcgcaggcagaacagtgtgacaga
acagccaacgccagctctttactgaatgaggacacaaatttattccacagtgcagaagaa
atgtatgctggggaaactccatttagtagtgaaaataaagagtctggcttagcgcacagc
tcagaaaaccaattagataaaagcaagaagacaggtaacagtgtccagcatacagaagct
gtagaaacatgtcaacctgagagtaactccctgcatgaaagggaacctgcttcagagagt
ctattgcagcccaagactcttcacggcaatcctttgagtcaagtttcagggaaaagactg
aagagaagcattcaaaaagtcaacgagtggttttctaaaagcaatgagatgctctcttct
ggttcctcccaggatgctcctgctggggcagctgacacagaagatggaaattcagattta
tcggacaaagagtcctgtatttcagagaagactgacctgatggtaaactgtacagaagtt
gtggtgggatgtgaaaatgataggagtttgtcaaaatcaactgtgcataacattgaagat
aaaatatttgggaaaacgtataaaagagaaaggaagtcaacccctcttgcccacacgaga
gagatgccactgagtccaaaagtggaagatgttactactgatgtgaaatcctcaagtaat
tccagaacaagtaaattaaaacggaaaagaaagactgcctctgatctccaacctgcggac
ttcatcaagaagagagatgaaaaggatctaaagaaacactctgagggcgttaatcagtgc
attgttggtagaaatgctcgaaggaaaaaaggtggtgaaggttccactgttgttaacggg
agtcccatgggtgtgaaaaatgatactgagaaagtaacttgcaacagcactgatggaaag
ccagcacaggatacctgtgaccgaaagaatactaaaaaaatgagaagctcattaacaaaa
agaagtaaacattcagctaggcccgtgtgtgctctgcagctggtagtggatagaaactca
agttgccctgatcagactgagctgcagattgatagttacccaagcagtgaagagccaaaa
aaagttgattcagaaaataaacgagtcagacgcagcaggaggcttcagttactgactgaa
aaaatgacaaaagaaaccaggagaagaagtgagccaaacgagagagcaagaaagcatgcc
agcgaaagcaaaaattcctcctctggattgcacgtgaatgtgttggtccatgtccctgaa
tgcaaagaccctgatgagcagcaggatgtactgaaccatagcatacctctgtcagacact
gagctgaagggcaatgccttagaagtagataaaacaccccctaatcctgaaaattgttct
gatggaatgcaaactggaaaaggcctcttgtatgccgaaatattggtggaggatttaaat
gcttgttctgttgtgcctgatacagattctcaagataatgaaaatcaaggaagccattcg
ctcctgcagcctcattccacaaatgtggatcaagctgcctgcctagtgcagaatttgtct
gagaataatcagtgtgctgcagttgagctcaagaacagagagttgtgtgcgtgttcaccc
aagactaatagacatttcccagaaaatgacttggaaaggttcagaaatccaaagtcacat
gaagctaaaatcatttcagagttgaacacagaaactgaagacagtgagctagaaacacag
tacctgcgaaatatgttcagacattcaaaaagactgtcatttacccttcatcctagtcca
gtcaaggaatctgtgatagaaagcactgcttctgaaactctaaggaaatcaggtgctagc
tgtgtagaatataggcataacaatagagacttaaaaagtgaacctccatatgttaaaaaa
acagtgggcctggatgaggtttgtgagagagaagagcctaaaacatgtgaatctgctaaa
ggtatttctgggcgtagtccaggaactcacttttccagggacaccgaacgtggacatgtt
agtgactatggcaagaatatttcacaagttccagatcaagtgcagttattctcaccacca
agagcagccactgccaagattaagattaagagtaggagcaggagcagactgcaaaaacga
aggcaaccaaaggaaaagagaatttcacctgaaatgatgatagaaagtcaattaagtcag
aacctaaacaaaagtaacggaagcctaggtgaccagagtaatatagaagagcgaatttcc
caaagaactgatttaagcacaattaatgaaacaggaagcaatcaaggagtaaaagctgaa
gaagctgaaaacaaagggccagtattaaatttacagcccaagccaatgctggtacatcct
gtagtttgtcgtccaagccctgctgaatttagctgcaaagtaattgaaaagaacggttat
gaaggggaatgcaaacaagtaaagagtgataaagaacaagtatcccaaattgccagcata
ggtgtgcctgagtgcttaatttcaggggaggctctggaacaacccactgaagggactagt
ggttttccattgctgtctgagacccctgatatcttattgtgcactgctggtgacattaaa
gagaacataagcatttgtgaaattgataagagagaaatttctgctgtatttgttaaaaca
ggtgagagagcctcattaagagaactggacagtggcagcagtagttctaagtctaggtct
caaaactttgttcgggaacccagaagaccagcctggaaattgcagtcctccgaggaggat
tctagtgaagatgaagaactaccttgctttcaggcattaatattcggcaaattagtaagc
acaccattgcagtctacaggacagatcatgtctatagtagagtcttcatcaccggaagag
attctagcattgttgaacagtagcagtggcaataataaagctgtacagaaaacgcctgga
gtcctcttgagagatgcatgtgtttctccaagccaagagtcagaatgctcacttaactta
ttttcttcccagtccaacatgtcagaagattcaaccaatagactacaagagctgaaaaag
cccataacacttgctccttgttccaaagaaatgagcagtttcagtggaagcagagaagct
agtccaaatggtaatgaagagctgacaggaagaaaaactgatttggaagatggacaccaa
cgagaccagaatgtgcaaccaaatttaggtgaagcatccggatatgacagtgaagccagt
caccaaggagattcttctgggctgtcctcccagggtgagatccttaccacccagcagaag
gatgccatgcaaaacaacttaaaagaacttcaacaggaaatggctgtgcttgaggccgtg
ctggaagagcatggaagccagggctttgaattcccaaccccacagagtgaactgcctcct
tcccgagtggaaggagcactcaccgtgggacaaatgagaccagctagaggaacagcatta
atttcagaagtaaatctcgaaaatcacaaaatcagcagttcaaagggactttcagctgat
gggttccatgtaatgccaagtgatcattccaacacaaaaaataaagagctagaagaagaa
ggtttgaggtcgcctgctttacagctttcccgtcctaaatcccatcttttaaaaaaagaa
gctctggagcaaggccactggtgcccgcgcctttggaaagccaaaactcactctcaggag
ggaacatttcagcgggttggtgtggcagtgctgctggaaaaagaggcaatgaaacaacgt
aatcagtatggaattgaatcagaaaatgcagctgagcaggaatttggaacaaagctaaac
agtgcagctgttccgtgtgggaatgagagcaggactccaaacggctctcccttgaaattt
tctgaaagacttacccactgtcaaactgcagaatcaagaaatagtgctgccatatcgtgg
aatgcgaataatgggaagagcactcagggatgtaagcaggagagaagggcattttcctat
gcatctgctctgcacactggagttgtaaaagaaaatgccaaaagcccagttgtgacctgt
aggagacaaatgtcaattgtagcatcaggtctgaaccagagagagcttttattggtgcag
aaatttgccaggaaaacccagagcactttatctaatcaaattactgaaggaacaacccat
gtcataatgaaaacagatatggagctagtttgtgagcggacactgaagtactttctgggc
attgcaggaagaaaatgggtagttagctatgaatggattgttcagtcttttaaggaagga
aagatacttgatgagtatgactttgaagtgagaggagacgtgatcaatgggagaaaccac
caaggccctaagagagctagacgatcccagactggaaagctcttcaaagacattgagatc
tgttgctatggaccattcaccgatatgcgcacaggtgatctagagtggatggtggagctt
tgtggcgcctcagtggtgaagcagcctcatctgttcacacacaaagctaactctactgct
gtaatagttgtacagcctgatgcttggctcgaatacgcagggtacagagtaatccaacag
aagtgtactgccatggtgacccgagagtgggttttagacagcgttgcatgctatgagtgc
caggagtttgatacctaccttgtgtcccagtcatga
DBGET
integrated database retrieval system
