Dermochelys coriacea (leatherback sea turtle): 119853353
Help
Entry
119853353 CDS
T09064
Symbol
MTR
Name
(RefSeq) methionine synthase isoform X1
KO
K00548
5-methyltetrahydrofolate--homocysteine methyltransferase [EC:
2.1.1.13
]
Organism
dcc
Dermochelys coriacea (leatherback sea turtle)
Pathway
dcc00270
Cysteine and methionine metabolism
dcc00450
Selenocompound metabolism
dcc00670
One carbon pool by folate
dcc01100
Metabolic pathways
dcc01230
Biosynthesis of amino acids
dcc04980
Cobalamin transport and metabolism
dcc04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
dcc00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
119853353 (MTR)
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
119853353 (MTR)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
119853353 (MTR)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
119853353 (MTR)
04980 Cobalamin transport and metabolism
119853353 (MTR)
Enzymes [BR:
dcc01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.13 methionine synthase
119853353 (MTR)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Met_synt_B12
S-methyl_trans
Pterin_bind
B12-binding_2
B12-binding
CdhD
IPT
Motif
Other DBs
NCBI-GeneID:
119853353
NCBI-ProteinID:
XP_038252252
LinkDB
All DBs
Position
3:136920276..137013263
Genome browser
AA seq
1299 aa
AA seq
DB search
MSHLLPCVSPGARGRLLPSFSVSSKTEARCPLLPLKVFLPPADDPLNTKKSLKDEIDSVL
RERIMVLDGGMGTMIQQHALSEEDFRGQEFKDHPKYLKGNNDLLSITQPDIIYKIHKEYL
LSGADIIETNTFSSTRVAQADYDLEHLVYQLNKVSAQVARKAADDVTAQTESRRFVAGAM
GPTNKTLSVSPSVERSDYRNITFDELVEAYQEQARGLLDGGVDILLVETIFDTANAKAAL
FALKKLFEEEYEPRPIFVSGTIVDKSGRTLSGQTGEAFVISVSHSDPLCVGLNCALGAVE
MRPFIETIGICTTAYIICYPNAGLPNAFGGYDETPEVTAKHLKSFALDGLVNIVGGCCGT
TPAHIREIAEAVKTCKPRIPPSFVAEGYMLLSGLEPFRIGPYTNFVNIGERCNVAGSKKF
AKLIMAGNYEEALSVAKAQVEMGAQILDINMDDGMLDGPSAMARFCNFIASEPDIAKVPL
CIDSSNFSVIEAGLKCCQGKCIVNSISLKEGEDDFLEKARRIKLYGAAVVVMAFDEVGQA
TETETKIAVCTRAYHLLVKKVGFNPNDIIFDPNILTIGTGMEEHNLYAINFISAAKTIKE
TLPGAKISGGLSNLSFSFRGMEAIREAMHGVFLYHAIKYGMDMGIVNAGNLPVYDDIHKE
LLRLCENLIWNKDPDATEKLLHYAQTHAQGGKKMVQTDEWRNSTVEERLEYSLVKGIEKF
VIEDTEEARLNYEKYPRSLNIIEGPLMNGMKVVGDLFGAGKMFLPQVIKSARVMKKAVGH
LIPYMEKEREEERAKSGSIEEKDPYHGTIVLATVKGDVHDIGKNIVGVVLGCNNFRVIDL
GVMTPCDKILRAAIENKADIIGLSGLITPSLDEMIFVAKEMERLEIKIPLLIGGATTSKT
HTAVKIAPRYSAPVIHVLDASKSVVVCSQLLDENLKDDFFEEIIEEYEDIRQDHYESLKE
RRYLSLEQARRKGFHNDWLSDYKPVKPKFFGTQVFEDYNLERLVEYIDWKPFFDVWQLRG
KYPNRGFPKIFNDKAVGEEAKRVYNDAQTLLKTLISQKKLQARGLVGFWPAQSVQDDIHL
YATEEALQSAEPIAKFYGLRQQAEKDSSCADPYYCLSDFVAPVDSGVCDYLGLFAVACFG
VDELCKEYEKQCDDYSSIMVKALGDRIAEAFAEELHERVRKELWAYCNSEQLDISDLRRI
RYDGIRPAPGYPSQPDHTEKFTMWRLADIEEATGIQLTESLAMTPASAVSGLYFSNPKSK
YFAVGKICKDQVEDYALRKNLPVVEVEKWLGPILAYDSE
NT seq
3900 nt
NT seq
+upstream
nt +downstream
nt
atgagccatttgctgccctgtgtttccccgggggcgcgggggaggctcctgccctccttc
tccgtttcctcgaaaaccgaggcgcgctgtccccttttaccgctaaaagtgtttcttcca
cccgctgatgatcctctgaataccaagaagagcttgaaagatgaaattgactctgttttg
cgggagcggattatggttttggatggaggcatggggaccatgatccaacagcatgcgcta
tcagaagaggacttccgaggacaagaatttaaggatcatccaaaatatctgaaaggcaac
aatgaccttttaagtataactcagcctgatataatctacaaaattcacaaggaatacttg
ctctctggggctgatatcattgaaacaaacactttcagcagcaccagagttgcacaagct
gactatgaccttgagcatctggtttatcagttaaacaaagtctcagcacaggtggccaga
aaagcagctgatgatgtgactgctcagacagagagcagacgatttgttgctggtgctatg
ggtcctacaaacaagacgctctctgtgtctccctcggtggaaagatcagactataggaac
atcacttttgatgagctggttgaagcataccaagaacaagccagaggactcttagatgga
ggggttgatatcttgttagtagaaaccatatttgatacagccaatgccaaggcagctctc
tttgctctcaagaaactgtttgaggaagagtatgaacccagaccaatatttgtttctgga
accattgtagataagagtggacgcactctctctggccagacaggagaggcatttgtcatt
agtgtatcccacagtgacccactttgtgttggcttaaactgtgcattaggggcagtggaa
atgaggcccttcattgaaacaattgggatatgtacgactgcctacatcatctgttatccc
aatgcaggtctccccaatgcctttggaggttacgacgaaacccctgaagtgactgccaag
catctaaagagttttgctttggatggtttggtcaacatagttggaggttgctgtggtact
actccagcacacatcagggagattgctgaagcagtaaaaacatgtaaacctcgtattccc
ccctccttcgttgcagaagggtatatgctgctgtcaggtcttgagcccttcaggattggc
ccatacaccaacttcgttaacattggtgaacgttgcaatgtggcaggatcaaagaagttt
gctaagctcatcatggcaggcaactatgaagaagctctgagtgtagccaaggcccaagtt
gagatgggagcccagattttggatatcaatatggatgatggaatgctggatgggccaagt
gctatggccagattttgtaacttcattgcttcggaacctgacattgctaaggtgccgtta
tgcatcgattcttcaaatttctctgtgattgaagctggcttgaagtgttgccaagggaaa
tgcatcgtgaacagcatcagcctgaaggaaggtgaagatgatttcctggaaaaagcaaga
aggattaagttgtacggagcagctgtggtggtcatggcttttgatgaagtgggtcaagcc
acagaaacggaaactaaaattgcagtgtgcaccagagcttaccacctccttgtgaagaaa
gtgggcttcaatccaaacgatataatttttgaccccaatattctgaccatagggactgga
atggaagaacataacctgtatgcaattaacttcatcagtgcagcgaaaaccataaaagaa
acactgccaggagctaaaataagtggaggcctttccaatctgtccttctccttccggggg
atggaagccattcgagaagcaatgcacggagttttcctgtatcatgcaattaagtatggc
atggacatggggatagtgaatgcagggaatcttccagtgtatgatgatattcacaaggaa
cttctacggctgtgtgagaatctgatctggaataaagacccagatgctacagagaagctt
ttacattacgcccagactcatgcccaaggaggaaagaaaatggtacagactgatgaatgg
cggaatagcaccgtggaggaaaggctggaatactcacttgtcaagggcattgaaaaattc
gtcattgaggacacagaagaggcacgattaaactatgaaaaatatcccagatctctgaac
ataattgaagggcccctaatgaatggcatgaaagttgttggtgatctttttggtgctgga
aagatgtttctgcctcaggtgataaagtctgctcgagttatgaagaaggcagttggccac
ctcattccctacatggaaaaggaaagagaggaagagagagctaaatctggcagcattgaa
gaaaaggacccttaccatggcacaatagtgctagctactgtaaaaggagacgtacatgat
attggcaagaatatcgtgggagtggtactaggctgcaacaatttcagagttatcgattta
ggagtcatgactccgtgtgataagatattgagagctgctattgaaaacaaagcagatata
attggcctgtctggtcttatcacaccttctttggatgaaatgatttttgttgccaaggaa
atggagagattagagatcaagattcctttgttgattggaggagcaactacatctaaaaca
catacagctgtgaaaattgccccacggtacagcgcaccggtcattcatgtccttgatgca
tccaagagtgtggtggtttgttctcagctgctagatgaaaacctgaaagatgatttcttt
gaagaaataatagaggagtatgaagacattagacaggaccactatgagtctctcaaggaa
agaagatatttgtcattagagcaagctaggagaaaaggttttcataatgactggctgtca
gactataaacctgttaaacctaaattctttggcactcaagtctttgaagattataaccta
gagaggctggtggaatacattgactggaagcctttttttgatgtctggcaacttcggggc
aaatatcccaaccgaggatttcctaaaatttttaatgataaagcagtgggagaagaagct
aaaagagtttataatgatgctcaaaccctactaaaaactttgattagccaaaagaaattg
caagccagaggcctggttgggttctggccagcacagagtgttcaagatgatattcattta
tatgcaacagaagaggcattgcagtctgcagaaccaatagctaaattttacggtttaagg
caacaggcagaaaaagactcctcctgcgcagacccatattactgcctctctgattttgta
gcccccgtggattctggtgtttgtgactatttaggcctgtttgctgtggcctgctttggg
gtagatgagctgtgcaaggaatatgagaaacagtgtgatgactacagcagcataatggtg
aaagcactgggagatcgtatagcagaggcatttgcagaggagctccatgaaagggtccga
aaagaactctgggcttactgcaacagtgaacagttggatatttcagacttgcgcaggatc
agatatgatggaatccgtccagctcctgggtacccgagccagcctgaccacactgaaaaa
ttcaccatgtggagacttgcagacattgaggaggcaacaggtattcagttaactgagtca
ctagcaatgacacctgcctctgcagtttcaggtctctacttctccaaccccaaatccaaa
tactttgctgttggtaaaatatgtaaggatcaggttgaagattatgcactgaggaaaaac
ttgccagtggttgaggttgagaaatggctggggcccatcctggcatatgattcggaataa
DBGET
integrated database retrieval system
