Dermochelys coriacea (leatherback sea turtle): 119853685
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Entry
119853685 CDS
T09064
Symbol
LTBP1
Name
(RefSeq) latent-transforming growth factor beta-binding protein 1 isoform X1
KO
K19559
latent transforming growth factor beta binding protein 1
Organism
dcc
Dermochelys coriacea (leatherback sea turtle)
Pathway
dcc04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
dcc00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
119853685 (LTBP1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
dcc04990
]
119853685 (LTBP1)
Domain-containing proteins not elsewhere classified [BR:
dcc04990
]
EGF-like domain-containing proteins
hEGF / cEGF domain-containing proteins
119853685 (LTBP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EGF_CA
cEGF
TB
EGF
EGF_3
hEGF
FXa_inhibition
EGF_MSP1_1
EGF_PEAR1L
EGF_TEN
Plasmod_Pvs28
EGF_2
Motif
Other DBs
NCBI-GeneID:
119853685
NCBI-ProteinID:
XP_038252977
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All DBs
Position
3:148906589..149298285
Genome browser
AA seq
1620 aa
AA seq
DB search
MAWIRWGFLLCACVFLSPALDAAEKSRLRRITYVLRPSQAGSPSRRLQSSAPLRGQQQQQ
QHAFNVELNTRYSTSTLERTRRMSKPASPSMQLRLGSSVQLHHRPGGPAALFSKPARLVQ
RSKLQPRETRSNGSSSPQVHQRHPLQGVNVCGGQCCHGWSKAPGFQRCTKPNCSPPCQNG
GMCLRPQLCVCKPGTKGNSCEDTVTQDTSSTGGQGPVAPPWPIPQQAAQQTFSQKVQVPQ
KVNPVAQMMFTLKQKPPVGLPQQLQSQMIPLSSETLMMNLHHGQTQEYVIKPKYYPAKKV
ISGEQSAEDSLPLRMGQNQLASPFRLGNHTGRIKVVFTPSICKVTCTKGNCQNNCEKGNT
TTLISENGHAADTLTATNFRVVICHLPCMNGGQCSSRDKCQCPPNYTGKLCQIPAKNANT
PKLYHQPQQASKTIGSHVIHSTHTLPLTMPGQQGVKVKFPPNVVNIHVKHPPEASVQFHQ
VSRIDSTSAGQKVKVPQPGHPQVSYQGVPYHKTQKGYSTYPHQQPIPHVFPVSAKTQLGR
CFQETTGTQCGKALPGLSKQEDCCGTVGTSWGFNKCHKCPKKPSYPGYTQMVECPQGYKR
INATFCQDINECQLQGVCPNGECLNTMGSYRCTCKMGFVPDPTLSRCIPDNPMVSEEKGP
CYRFVSAGKQCMHPLSVQLSKQLCCCSVGKAWGPHCEKCPLPGTAAFKEICPGGMGYTVS
GSHRNKLYHHPAVRVQPPVIGKTQITQPVAKGTSPPPLPAKEEPVEALTFSQKSEPEVAV
QEVATAAPDQELVSLDDQEKPVLEPGQPQLSPGISTINLHPQFPAVIEKTSPPLPVEVAP
EVSTSSASQVIAPTQVTEINECTVNPDICGAGHCVNLPVGYTCICYDGYKLNDQQTKCSD
INECAQTPLLCSLGHCENTEGSFLCICPTGFVANEEGTECIDIDECLTQSICPDEQCING
PGSYHCVPCTDGFRGWNGQCHDIDECQYGNLCTNGHCENIEGSFRCTCSQGYKLSAAGDQ
CEDIDECQQHHLCTNGNCRNTDGSFRCICSQGYTLSSMGDQCEDINECLQDSDICLRGNC
MNTEGSYECTCPDGFQQMANRGCQDINECEGSELCLPHGECLNTDGSFHCICEQGFSVST
DGQTCEDVDECVNSTLCGSHGFCENTPGSYRCLCYQGYQDPQDGQGCVDVNECEMLSGVC
GEALCENVEGTFLCLCSDENQEYDPMTGQCRFRTSTDLPVDVGQPADEKKECYYNLNDAN
FCDNVLTSNITKQECCCTLGAGWGDNCEIFPCPVFGTAEFTDLCPEGKGFIPSGDSSYGV
ITQNYRDADECLLFGQEICKNGFCLNTQPGYECYCKQGTYYDPVKLQCFDTDECQDPTSC
VDGQCINTEGSYNCFCTHPMVLDATEKRCIRPADSNEQTEETEVYQDLCWQHLSEDFVCS
RPLVGKQTTYTECCCLYGEAWGMQCALCPMKDSEDYAQLCNVPVPGSRRPYGQDALVDFE
EHYTPETDPFFVEDRFLNSFEELQAEECGILNGCENGRCVRVQEGYTCDCFDGYHLDMAK
MTCVDVNECNELNSRMSLCKNAKCINTEGSYKCLCLPGYVPSDKPNYCTPLNSEIDSELE
NT seq
4863 nt
NT seq
+upstream
nt +downstream
nt
atggcttggatcaggtggggctttttgctctgtgcatgtgtatttttgtcaccggcactc
gatgccgctgaaaagagcaggctgaggagaatcacatacgtactgcgccccagccaggcg
ggctcccccagccgccggctgcagagctcggctcctctccggggccagcagcagcagcag
cagcacgcttttaacgtcgagctgaatacccgctacagcaccagcaccctagagcggact
cgcaggatgagcaaaccggcaagtcccagcatgcagctccgcttgggctccagcgtgcag
ctccatcacagacccggtggccccgcagccctcttctccaagccagcccggctggttcag
cgctccaagctgcagccacgggagacccgcagcaacggcagctccagcccgcaggttcac
cagaggcacccgctgcagggggtgaatgtctgtggaggacagtgctgtcatggctggagc
aaagctcctggcttccagaggtgcaccaaacctaactgttcgccaccatgccaaaatgga
gggatgtgtctgcgacctcagctttgtgtgtgtaaaccagggacgaaaggtaactcctgt
gaggatactgtcacgcaagatacctcttccaccggaggtcagggccctgtggcaccaccg
tggccaattcctcagcaggctgctcagcagactttctctcagaaggtacaggttccacag
aaagtcaacccagtggctcagatgatgttcactctcaagcagaagccccctgttggatta
cctcagcaactgcaatcacaaatgatacccctttcatctgagactttgatgatgaatctt
catcatggccagacacaagaatatgtgatcaaacccaaatattatccagcaaagaaagtg
atttcaggagaacaatccgctgaggattcattgcctctaagaatgggccagaatcaactt
gcatcacctttccgtttgggaaatcacactggccgcatcaaggtggtctttacacccagc
atctgtaaagtgacttgtaccaagggcaattgtcagaacaactgtgagaagggaaatacc
accaccctcattagtgaaaatggccatgcagctgacaccctgacagccactaatttccga
gtagttatttgtcaccttccgtgcatgaatggtggccagtgcagttctagagataaatgc
cagtgccctcctaattatactggtaaactctgtcaaatcccagcaaagaatgccaatact
ccaaaactttaccatcaaccacagcaggcaagcaagaccattggatcacatgtcatccac
tctactcatactttaccactgactatgcctggacagcaaggagtaaaagtgaagttccct
cctaacgtagtgaatatccatgtgaaacatccccctgaggcctcagtacagttccatcaa
gtttcaagaattgacagcacatcagcaggacagaaagtgaaagtaccccagccaggacat
ccccaggtctcttatcaaggtgttccatatcacaagacccagaaaggatattctacttac
ccacatcagcaacccattcctcatgtgtttcctgtttctgctaaaactcagcttgggcgc
tgctttcaggagactactggaacacagtgtggtaaagcgctccctggcctatcaaagcaa
gaagactgctgtggaactgtgggtacttcctggggctttaataaatgtcacaaatgtccc
aagaagccatcttaccctggatacacccaaatggtggaatgcccccaaggttacaagaga
attaatgctaccttttgtcaagacattaatgaatgccagctgcaaggggtatgccctaat
ggtgagtgtttgaataccatgggcagctacagatgtacctgcaaaatgggatttgtgcca
gaccctactctttcaagatgcatacctgataatcctatggtctctgaagagaaagggccc
tgttaccggtttgtcagtgcaggaaagcagtgcatgcaccctctctctgttcagctcagc
aagcagctctgctgttgcagtgttggcaaggcctggggcccacactgtgagaaatgtccc
cttccaggaacagctgcttttaaggaaatctgccctggtggaatgggttatacggtttct
ggctctcatagaaacaagctatatcatcaccctgcagttagagtacagccacctgtcatt
ggcaagacccagattactcaacctgttgctaaaggtacttctcctccacctctcccagca
aaggaagagccagtggaggcactgaccttctcacagaaaagtgagcccgaggtggctgtg
caagaagtggcaactgcagcccctgatcaggaattagtttcacttgatgatcaagaaaaa
cctgtgctagagcctggtcaacctcagctttctcctgggatttcaacaattaacctgcat
ccacaatttccagcagtgattgaaaaaacctcccctcccctgcctgttgaagttgcccct
gaagtttctacttcaagtgcaagtcaagtaattgcacctactcaagttacagaaatcaat
gagtgcacagtgaaccctgatatctgtggagcaggacactgcgttaatttgcctgtggga
tacacctgcatctgctatgatgggtacaagctgaatgatcaacagacaaaatgctctgat
atcaatgaatgtgctcagactccccttctgtgctcccttgggcactgtgaaaatacagaa
gggagtttcctatgcatttgcccaacaggattcgtggccaatgaagaaggaacagaatgc
attgatattgacgaatgcctgacccaaagtatttgtccagatgaacaatgcattaatggt
cctggctcttaccactgcgttccttgcacagatggattcagaggctggaatggacagtgc
catgatatagatgaatgtcagtatggcaatctctgtacaaatggacattgtgaaaacatc
gagggatctttcagatgtacttgtagccaaggttataaactatctgcagcaggggaccag
tgtgaagatatcgatgaatgccagcaacatcatctctgcacaaatgggaattgcagaaac
acagatgggtctttcagatgtatttgtagccaaggttatacattatcatctatgggagac
caatgtgaagacattaatgaatgccttcaagacagtgatatttgccttagaggaaactgc
atgaatactgaaggttcttatgagtgcacttgtccagatggcttccagcagatggccaac
aggggatgtcaagatatcaatgaatgtgaaggatctgaactctgtttgccacatggggaa
tgcctaaatacagatggttctttccactgcatttgtgaacaaggcttttcagtttctaca
gatggccaaacatgtgaagatgttgatgaatgtgttaacagcactctatgtggcagtcat
gggttctgtgaaaatacacctggttcctaccgctgcctttgttaccaggggtatcaggac
ccacaggatgggcaagggtgtgtggatgtgaatgaatgtgaaatgctgagtggggtatgt
ggtgaagccctctgtgaaaatgtagaaggcaccttcctgtgtctctgttccgatgaaaac
caggaatatgatccaatgactggacaatgtcgcttccgcacatcaacagatttaccagta
gatgttggtcaacctgcagatgaaaagaaggaatgctactacaatctaaacgatgctaat
ttctgtgataatgtgttgacatccaacatcaccaaacaagaatgttgctgtacgttgggt
gctggctggggtgataactgtgaaatcttcccatgccccgtctttggaactgctgaattt
actgatttgtgtcctgaaggaaaaggtttcatcccctctggtgattcatcatatggagtc
attacacagaattacagagatgcagatgaatgcctgctcttcggacaagaaatctgtaaa
aatggcttctgtctgaacacacagccaggttatgagtgttactgtaaacaaggcacatac
tatgatcctgttaaactccagtgctttgatacagatgaatgtcaggacccaaccagctgt
gtggatggccagtgcattaacactgaaggatcttacaactgtttctgtacccatccaatg
gttctggatgccacagaaaagcggtgtatcagaccagcagattcaaatgaacaaactgaa
gaaactgaagtctaccaggatctttgctggcaacatctgagtgaggattttgtttgtagc
cggcctctggttggaaagcagactacgtacactgagtgctgctgcttatatggtgaggcc
tggggcatgcagtgtgcactctgtcccatgaaggactcagaggattatgcccagctgtgc
aatgttccagttccaggatctcgacgaccatatggacaagatgctttggttgactttgag
gaacactataccccagaaactgatccattctttgttgaagaccgtttcctgaacagcttt
gaggagctacaagcagaggaatgtggcattctgaatggatgtgaaaatggacggtgtgtg
agagtccaggaaggctatacctgtgattgttttgatggctaccacttggacatggccaaa
atgacttgtgttgatgtgaacgaatgcaatgaattgaacagtaggatgtctctctgcaag
aacgccaagtgcattaacacagagggttcatataagtgtttgtgtctgccaggctatgta
ccttcagacaagccaaactactgcacaccactgaactcggaaatagacagtgaactggag
tag
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