Dermochelys coriacea (leatherback sea turtle): 119856237
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Entry
119856237 CDS
T09064
Symbol
PRDM6
Name
(RefSeq) putative histone-lysine N-methyltransferase PRDM6 isoform X1
KO
K20795
[histone H4]-lysine20 N-methyltransferase PRDM6 [EC:
2.1.1.361
]
Organism
dcc
Dermochelys coriacea (leatherback sea turtle)
Pathway
dcc00310
Lysine degradation
dcc01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
dcc00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
119856237 (PRDM6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
dcc03000
]
119856237 (PRDM6)
03036 Chromosome and associated proteins [BR:
dcc03036
]
119856237 (PRDM6)
Enzymes [BR:
dcc01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.361 [histone H4]-lysine20 N-methyltransferase
119856237 (PRDM6)
Transcription factors [BR:
dcc03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
119856237 (PRDM6)
Chromosome and associated proteins [BR:
dcc03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
119856237 (PRDM6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRDM2_PR
zf-C2H2
zf-H2C2_2
zf-C2H2_4
SET
Zap1_zf1
zf-C2H2_11
zf-C2H2_jaz
zf-C2H2_15
Motif
Other DBs
NCBI-GeneID:
119856237
NCBI-ProteinID:
XP_038259474
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All DBs
Position
5:79233507..79332628
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AA seq
563 aa
AA seq
DB search
MLKPGDPGGSAFLKVDPAYLQHWQQLFPQSSQLKSSGALSQLPPPPDPAADSLRQRPASL
SSASSSSSSSSSSTPSSSTSAASLAGLASISVAQIPAFGPLPSSEAPSGAPASLQSKDLG
GGGAKGSERAAPRFRCTAEELDYYLYGQQRMEIIPLNQHTSDPNNRCDMCADNRNGECPM
HGPLHSLRRLVGTSSAAAAAPPPEIPEWLRDLPREVCLCTSTVPGLAYGICAAQRIQQGT
WIGPFQGVVLLPEKVQTGVIRNTQHLWEIYDQDGTLQHFIDGGEPSKSSWMRYIRCARHC
GEQNLTVVQYRSNIFYRACIDIPRGTELLVWYNDSYTSFFGIPLQCIAQDENLNVPSTVM
EAMSRPDTLQSFNKSSKLPPATPQRSIVFPQTPCSRNFSLLDKSGPIESGFNQISVKNQR
VLASPTSTSQLNSEFSDWHLWKCGQCFKTFTQRILLQMHVCTQNPDRPYQCGHCSQSFSQ
PSELRNHVVTHSSDRPFKCGYCGRAFAGATTLNNHIRTHTGEKPFKCERCERSFTQATQL
SRHQRMPNECKPITESTESIEVD
NT seq
1692 nt
NT seq
+upstream
nt +downstream
nt
atgttgaagcccggcgacccaggcggatccgctttcctgaaggtggatcccgcctatctc
cagcactggcagcagctgttcccgcagagcagccagctcaagagcagcggggccctcagc
cagctcccgccgccgcccgatcccgcggccgacagcctccgccagcgcccggcctctctc
tcctccgcttcctcttcctcttcctcttcgtcttcgtccaccccgtcttcctccacctcc
gccgcttccctggccgggctggcctcgatctctgtggcccagattcccgccttcgggccg
ctaccgagctccgaggccccctccggagccccggcctccctgcagagcaaagacttgggc
ggcgggggcgccaagggcagcgagcgggctgcgcccaggtttcgctgtacggcagaggag
ctggactattacctgtatggacagcagcgcatggagatcatccccctgaaccagcacacc
agtgaccccaacaaccgatgtgacatgtgtgctgataaccgcaatggcgagtgccccatg
catgggccacttcactctctgcgccgcctagtgggcactagtagtgctgcagctgcagca
cctccacctgagatccctgaatggctcagggaccttccccgggaagtgtgtctgtgtacc
agtactgtacctggtctggcctatggcatctgcgctgcgcagaggatccagcagggcacc
tggattgggcccttccagggagttgttcttctgccagagaaggttcaaacgggagtcatc
aggaacacgcagcacctctgggaaatatatgaccaagatgggacactacagcactttatt
gatggcggggaacccagtaagtcaagttggatgaggtatatccgatgtgcaaggcactgt
ggggaacagaatctaaccgtagttcagtacaggtcaaatatattctacagggcctgtata
gatatccccagaggcactgaactgctggtgtggtacaatgacagctacacatctttcttt
ggaatccctttacagtgtattgcacaggatgaaaacttgaatgtcccttcgactgtaatg
gaggccatgtccagaccagacactctacagtcatttaacaaaagtagtaaactaccccct
gccactccacagcgatccatagtatttccacagactccgtgtagcagaaatttttctctt
ctggataagtctgggcccatcgagtcaggatttaaccagatcagtgtcaaaaaccaacga
gttcttgcaagcccaacgtcaacgagccaactaaattctgaattcagtgactggcacctt
tggaaatgtgggcaatgctttaagactttcacccagcggatcctcttacagatgcatgtg
tgtacgcagaaccctgacagaccctatcagtgtggccactgctcccaatctttctcccaa
ccttcggaactaaggaaccatgtagtcacccattccagtgacagacctttcaagtgcggc
tattgcggtcgtgcctttgctggtgctacaacactcaacaatcatatccggacacataca
ggggaaaaaccctttaagtgcgagaggtgtgagaggagcttcacacaagccacccagctg
agtcgacaccagaggatgcccaatgagtgcaagccaataacagaaagcacagaatcaatt
gaagtggattaa
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