Dermochelys coriacea (leatherback sea turtle): 119857170
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Entry
119857170 CDS
T09064
Symbol
THBS1
Name
(RefSeq) thrombospondin-1
KO
K16857
thrombospondin 1
Organism
dcc
Dermochelys coriacea (leatherback sea turtle)
Pathway
dcc04115
p53 signaling pathway
dcc04145
Phagosome
dcc04148
Efferocytosis
dcc04350
TGF-beta signaling pathway
dcc04510
Focal adhesion
dcc04512
ECM-receptor interaction
dcc04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
dcc00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
119857170 (THBS1)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
119857170 (THBS1)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
119857170 (THBS1)
04148 Efferocytosis
119857170 (THBS1)
09143 Cell growth and death
04115 p53 signaling pathway
119857170 (THBS1)
09144 Cellular community - eukaryotes
04510 Focal adhesion
119857170 (THBS1)
09142 Cell motility
04820 Cytoskeleton in muscle cells
119857170 (THBS1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
dcc04131
]
119857170 (THBS1)
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
dcc00536
]
119857170 (THBS1)
Membrane trafficking [BR:
dcc04131
]
Endocytosis
Phagocytosis
Opsonins
119857170 (THBS1)
Glycosaminoglycan binding proteins [BR:
dcc00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
119857170 (THBS1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TSP_C
TSP_3
TSP_1
TSP1_spondin
VWC
TSP1_CFP_C
EGF_3
cEGF
TSP1_CCN
TSP1_ADAMTS
Laminin_G_3
EGF
Laminin_G_2
Motif
Other DBs
NCBI-GeneID:
119857170
NCBI-ProteinID:
XP_038261626
LinkDB
All DBs
Position
6:complement(69141728..69167028)
Genome browser
AA seq
1176 aa
AA seq
DB search
MELSGGLFLLLMFGVCGTNQIPESGGDDNSVFDLFELIGFTRKGAGRRATGVHLVKGPEP
SSPAYRIEDASRIPAVPDDKFQDLLDAIYAEKGFILLATLRQAKKSRGTLLAVERKDSSG
HIFNLVSNGKAGTLDLSLSGDGKQQVVSVEDALLATGHWKNITLFVQEDRAQLYVGCEKM
ENAELDIPIQNIFTRDLASSAKLRIAKGGVNDNFQGVLQNVRFVFGTTLEAILRNKGCSS
STSAIITLDNPINGSSPAIRTNYIGHKTKDIQAVCGFSCDELTNMFVEMQGLRSMVTTLQ
DRVRKVTEENELIAKVVQITPGVCIHNGILHKNKEEWTIDSCTECTCQNSATICRKVSCP
LMPCSNATVPDGECCPRCWPSDYAEDGWSPWSEWTSCSVTCGNGVQQRGRSCDSLNNRCE
GSSVQTRTCHIQECDKRFKQDGGWSHWSPWSSCSVTCGTGMITRIRLCNSPVPQMNGKPC
EGEARETKSCQKDPCPINGNWGPWSPWDVCTVTCGGGIQKHGRLCNDPEPQYGGKDCIGD
ATGTQVCNKQDCPIDGCLSNPCFAGTTCTSSPDGSWKCGACPTGYHGNGVQCKDIDECQE
VPDTCFVLNGVHRCENTEPGYNCLPCPPRFTGTQPFGRGIEDATVNKQVCKPRNPCTDGT
HDCNKNAKCNYLGHFSDPMYRCECKPGYAGNGIICGEDTDLDGWPNENLVCVANATYHCK
KDNCPNLPNSGQEDYDKDGIGDACDNDDDNDNIPDDRDNCAFIYNPQQYDYDRDDVGDRC
DNCPYNHNPDQIDTDNNGEGDACAVDIDGDGILNERDNCQYVYNVDQKDTDLDGVGDQCD
NCPMEHNPDQEDSDSDRIGDKCDNNQDIDEDGHQNNLDNCPYVPNANQADHDKDGKGDAC
DHDDDNDGIPDDKDNCRLVANPDQTDSDGDGRGDACKDDFDQDNVPDIDDICPENVDISE
TDFRRFQMVPLDPKGTSQNDPNWVVRHQGKELVQTVNCDPGLAVGFDEFNAVDFSGTFFI
NTERDDDYAGFVFGYQSSSRFYVVMWKQITQSYWDSTPTKAQGYSGLSIKVVNSTTGPGE
HLRNALWHTGNTAGQVRTLWHDPRHIGWKDFTAYRWRLSHRPKTGYIRVVMYEGKKIMAD
SGPIYDKTYAGGRLGLFVFSQEMVFFSDLKYECRDP
NT seq
3531 nt
NT seq
+upstream
nt +downstream
nt
atggagctatcaggcggactttttctgctcctaatgtttggtgtctgcggaacaaaccag
atcccagagtctgggggcgatgataacagtgtgtttgatctcttcgaactcatcggcttc
actcgcaagggggccggacgtcgggcaactggggtgcacttggtgaagggacctgagccc
tccagccctgcttaccgcattgaggatgccagccgcatcccagccgtgcctgatgacaag
ttccaagatttgctggatgccatctatgctgagaagggcttcatcttgctggctaccctc
aggcaggccaaaaagagccggggcaccctgctggccgtggagcgcaaggacagctctggc
catatcttcaacctggtgtctaacggcaaggcaggcaccctagacctgagtctgtctggt
gatggcaagcagcaggtggtgtcagtggaggatgccctgctggccactgggcactggaag
aacatcaccctgttcgtgcaggaggaccgggcccagctgtatgtagggtgtgagaaaatg
gagaatgctgaactggacatccccatccaaaacatcttcaccagggacctggccagcagt
gccaagctccggatcgccaagggtggtgtcaatgacaacttccagggagtgctgcagaat
gtgcggtttgtctttggaacaaccctggaagccatcctaaggaacaaaggttgctccagc
tccactagtgcaatcattacattggacaatcccatcaatggctccagtccagctattcgt
actaattacattggccacaaaacaaaggatatccaggcagtctgtggcttctcctgtgat
gaacttacaaatatgtttgtggaaatgcaaggattgcggtccatggttacaacacttcaa
gacagagtgcgcaaagtgactgaagaaaatgaattgattgccaaagtagtgcagatcact
cctggtgtgtgcattcataatggaattctgcacaaaaataaagaagagtggactattgac
agctgtactgaatgtacttgccagaattctgccactatatgcaggaaagtgtcttgccct
ctcatgccttgttctaatgccactgttcctgatggggaatgctgcccacgatgctggccc
agtgactatgcagaagatggctggtccccttggtctgagtggacttcatgttctgtgacc
tgtgggaatggggttcagcagagaggccgttcttgtgatagtctcaataatcgctgtgaa
ggttcctctgtgcagactcgaacctgccacattcaggagtgtgataagaggttcaaacag
gatggtggttggagccattggtcgccatggtcatcatgttctgttacctgtggcactggc
atgatcactagaatccgtctttgcaactctccagtcccacagatgaatggcaaaccatgt
gagggtgaggcaagagaaaccaaatcatgccagaaagatccttgcccaataaatggaaac
tggggaccctggtctccatgggatgtatgtacagtcacatgtggaggaggcattcaaaaa
catggacgtctttgcaatgaccctgagcctcagtatggtgggaaggactgcataggtgat
gccacagggacccaggtctgcaacaagcaggactgtccaattgatggatgcctatctaat
ccttgctttgcgggaacgacatgtaccagctcccctgatggttcctggaagtgtggtgcc
tgccctactggttaccatggcaatggtgttcaatgcaaagatattgatgagtgtcaagag
gttcccgatacctgctttgtcctcaatggcgtgcacaggtgtgagaacactgaacctgga
tacaactgtttgccttgcccaccacgtttcactggaactcagccttttggtcggggtatt
gaggatgccacagttaacaagcaggtctgcaaaccacgtaatccatgcacagatggaact
catgattgcaacaagaatgccaagtgcaattaccttggccacttcagtgaccccatgtat
cgctgtgagtgtaaaccaggctatgctggcaatggcataatctgtggagaagatactgat
ttagatggatggccaaatgagaaccttgtctgtgttgccaatgccacttatcactgcaaa
aaagataactgtcccaatcttcccaactctgggcaggaagactatgataaggatggaatt
ggtgatgcatgtgataatgatgacgataatgataacattccagatgacagggacaactgc
gcattcatttacaacccacagcagtatgactatgatagggatgatgttggtgaccgctgt
gataattgcccctacaatcacaaccctgatcagattgacactgataacaatggagaagga
gatgcatgtgctgtggatattgatggagatggcattcttaatgaaagggacaattgccaa
tatgtctacaacgtagatcagaaggatacagatttggatggtgttggggatcagtgtgac
aactgccctatggaacacaatccagaccaggaggattctgactctgaccgcataggtgat
aaatgtgacaacaatcaggacatagatgaagatggccatcaaaataacctagataactgc
ccctatgtgcccaacgccaatcaagctgaccacgacaaggatggcaaaggtgatgcctgt
gatcatgatgatgacaatgatggtatccctgatgacaaagataactgcagactagttgcc
aacccagaccaaactgactctgatggtgatggacgtggagatgcttgcaaagatgacttt
gaccaagacaatgtgccggacattgatgacatctgccctgagaatgttgacattagtgag
acagacttccgtcgatttcagatggttcccctggatcctaaaggaacatcgcaaaatgat
cctaactgggtggttcgtcaccagggtaaagagctggttcagactgtcaattgtgatcct
ggacttgcagtgggatttgatgaattcaatgctgtggacttcagtggcacattcttcatc
aatacagaaagggatgatgactatgctggctttgtatttggttatcaatctagcagccgt
ttctatgtagtcatgtggaagcaaatcacccagtcttattgggactcaacaccaaccaaa
gctcagggatactcaggtctttctatcaaagttgtgaactctaccacaggtcctggagag
caccttcgaaatgctctgtggcacacaggaaacaccgctgggcaggtgcggaccttgtgg
catgatcctcgtcacataggctggaaagattttactgcctacagatggcgtcttagccac
agaccaaagactggctacattagagttgtaatgtatgaagggaagaaaatcatggctgat
tcaggaccaatctatgataaaacttatgctggtggtcggttaggattatttgtcttctct
caagaaatggtgttcttctcagatcttaaatatgaatgcagagatccataa
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