Dermochelys coriacea (leatherback sea turtle): 119858204
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Entry
119858204 CDS
T09064
Name
(RefSeq) collagenase 3-like
KO
K07994
matrix metalloproteinase-13 (collagenase 3) [EC:3.4.24.-]
Organism
dcc
Dermochelys coriacea (leatherback sea turtle)
Brite
KEGG Orthology (KO) [BR:
dcc00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
dcc01002
]
119858204
Peptidases and inhibitors [BR:
dcc01002
]
Metallo peptidases
Family M10
119858204
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Gene cluster
GFIT
Motif
Pfam:
Peptidase_M10
Hemopexin
PG_binding_1
Reprolysin_3
Reprolysin_5
Reprolysin_4
DUF4953
Motif
Other DBs
NCBI-GeneID:
119858204
NCBI-ProteinID:
XP_038264168
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All DBs
Position
1:complement(32569590..32578412)
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AA seq
499 aa
AA seq
DB search
MTHQFRSIKVKVFTLLKNQSFRTQEFSMMHPSLAAAFLFLLGLSYCLTLPIPHEDSDEFT
TEDLQFAERYLKTHYNLRSSPAGIRKKNANSVAAKLREMQSFFGLEVTGLLDEETYELMQ
QPRCGVPDVGEYNFFPRKLKWSKNNLTYRIVNYTRDLTRAEVDRAFKKAFKVWSEVTPLN
FTRIRSGTADIMISFGTKEHGDFYPFDGPSGLLAHAFPPGPNYGGDAHFDDDETWSADSR
GYNLFLVAAHEFGHSLGLEHSRDPGALMFPIYTYTGNTGFLLPDDDVQGIQTLYGAGDRD
PNPEHPKTPEKCDENLSLDAITELRGEMMIFKDRFFWRLHPQMVDAELMLIKSFWPELPN
KIDAAYENPMKDHVFIFRGRKFWALNGYDIVEGYPKKIYELGFPREMKTIDGAVHIKDTG
KTLFFTGDKYWSYDEENQVMEKGYPKLIEEEFPGIGNRVDAVYQKNGYIYFFNGPLQFQY
GIWSKRIVRVLKTNSMFWC
NT seq
1500 nt
NT seq
+upstream
nt +downstream
nt
atgactcaccagtttaggtctataaaagtaaaagtatttacactcttaaaaaatcagagt
ttcagaacccaagaattcagcatgatgcatccaagccttgcagctgccttccttttcttg
ctgggcttgtcatactgtttgacactgcctattccccatgaagacagcgatgaattcaca
acggaagacctccagtttgcagagcgctatctaaagacacattacaacctacgttccagt
cctgctggcataagaaagaagaatgccaactcagtggcagccaaacttcgagaaatgcag
tctttttttgggctggaggtgactggcctattagatgaagaaacatatgagctgatgcaa
cagccaagatgtggtgtccccgatgtgggggaatacaactttttccctagaaaactaaaa
tggtcaaaaaataatttaacatacagaattgtgaattacactcgagatctgacacgtgct
gaagtggacagagcattcaaaaaagcattcaaggtttggtctgaagtgacaccactgaac
tttactagaattcgtagtggtactgctgatatcatgatttcctttggaactaaagaacat
ggtgacttttatccctttgatggaccttccggattactggctcatgcttttcctcctgga
ccaaattatggaggagatgcccattttgacgatgatgaaacctggtcagctgattccaga
ggatacaacttgtttcttgtggctgcccatgagtttggtcactctttgggacttgagcac
tccagagacccgggagctctgatgttccctatttacacctacactggcaacactggattc
ttgcttcctgacgatgatgtgcaagggatccaaactctctatggtgcaggagacagagat
cccaaccccgaacaccccaaaactccagagaaatgtgatgaaaatttgtcacttgatgca
ataacagaacttcgaggagaaatgatgatcttcaaggacaggttcttctggcgcctacat
cctcagatggtggatgcagaactgatgttaattaagtcattttggccagaacttccaaac
aagattgatgctgcctatgaaaaccccatgaaagatcatgtgttcatatttaggggcagg
aaattctgggctctgaatggctatgacatagttgaaggttaccctaaaaaaatatatgaa
ttgggattccccagagagatgaaaacaatagatggggctgtccacattaaagacactggc
aagactctcttttttactggagacaagtactggagctatgatgaagaaaaccaagttatg
gaaaaaggctaccccaaactgatagaggaagaattcccaggaattggcaatagagtggat
gcagtctaccaaaaaaatggttacatctactttttcaacggaccactgcagtttcaatat
ggcatctggagtaaaagaattgttcgtgtcttgaaaactaactccatgttctggtgctaa
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