Dermochelys coriacea (leatherback sea turtle): 119858275
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Entry
119858275 CDS
T09064
Symbol
IFT122
Name
(RefSeq) intraflagellar transport protein 122 homolog isoform X2
KO
K19656
intraflagellar transport protein 122
Organism
dcc
Dermochelys coriacea (leatherback sea turtle)
Brite
KEGG Orthology (KO) [BR:
dcc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
dcc03037
]
119858275 (IFT122)
Cilium and associated proteins [BR:
dcc03037
]
Primary cilia and associated proteins
Intraflagellar transport (IFT) complex A
119858275 (IFT122)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_IFT122_1st
Beta-prop_IFT122_2nd
Zn_ribbon_IFT122
WD40
Zn_ribbon_IFT122_C
Beta-prop_EML_2
WD40_WDHD1_1st
WD40_Prp19
WD40_CDC20-Fz
EIF3I
ANAPC4_WD40
Beta-prop_RIG_2nd
TPR_IF140-IFT172
WDR55
Beta-prop_WDR19_1st
Beta-prop_TEP1_2nd
NBCH_WD40
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_2nd
Beta-prop_NUP159_NUP214
Beta-prop_Vps41
TPR_GEMI5
Beta-prop_WDR35_TULP_N
Beta-prop_WDR90_POC16_2nd
TPR_IFT80_172
Beta-prop_EML
Beta-prop_IFT140_1st
Beta-prop_HPS5
eIF2A
B-prop_COPA_B_2nd
PEP5_VPS11_N
TPR_7
WD40_MABP1-WDR62_1st
WDR90_beta-prop_4th
TPR_COPA_B
Beta-prop_IFT140_2nd
Beta-prop_WDR75_1st
Beta-prop_SPT8
Ge1_WD40
Motif
Other DBs
NCBI-GeneID:
119858275
NCBI-ProteinID:
XP_038264378
LinkDB
All DBs
Position
7:19040628..19095929
Genome browser
AA seq
1184 aa
AA seq
DB search
MRAALTWRDKAEQCIYDLAFKPDGTQLIIAAGNRLLVYETSDGTLIQPLKGHKDTVYCVA
YAKDGKRFASGSADKSVIIWTSKLEGILKYTHNDSIQCVSYNPVTHQLASCSSSDFGLWS
PEQKSVSKHKSSSKITCCSWTNDGQYLALGMFNGIVSIRNKNGEEKVKIERPGGSLSPVW
SICWNPSRDEHNDILAVADWGQRLSFFQLSGKQIGKDRVLNFDPCCISYFSKGEYILMGG
SDKQVSLYTKDGVRLGTIGDQSSWVWTCKVKPDSNYVAIGCQDGTISFYQLIFSTVHGLY
KDRYAYRDSMTDVIVQHLITEQKVRIKCRELVKKIAIYKNRLAIQLPEKILIYELYSDDS
SDMHYRVKEKIAKKFECNLLVVCSDHIILCQEKRLQCLSFNGVKEREWLMESLIRYIKVI
GGPSGREGLLVGLKNGQILKIFVDNLFAIVLLKQSTAVRCLDMSASRNKLAVVDENDTCL
VYDIHTKELLFQEPNANSVAWNTQCEDMLCFSGGGYLNIKASNFPVHQQKLQGFVVGYNG
SKIFCLHVFSMSAVEVPQSAPMYQYLERKMFKEAYQIACLGVTDTDWKELAMEALEGLEF
ETAKKAFTRVRDLRYLELISSIEERKKRGESNNELFLADVYAYKGKFHEAAKLYRKSGHE
SLALDMYTDLRMFEYAKDFLGSGDPKDTKMLITKQADWAKNINEPKAAVEMYISAGEHMK
AIEISGDHGWVDMLIDIARKLDKAEREPLSKCAYYFKRLDNHGYAAETYMKIGDLKALVH
LHVKTQRWEEAFALSEKHPEFKDDVYVPYAQWLAENDRFEEAQKAFHKAGRQSEAVKVLE
QLTRNAVVESRFNDAAYYYWMLSMQCLDIAQENEQQKTEMLQKFHHFQHLAELYHVYHSI
HRYTEEPFSFHLPETLFNISRFLLHSLTKETPLGISKVNTLFALAKQSKALGAYKLARHA
YDKLQGLQIPVRFQKSIELGSLTIRSKPFHDSEELVPLCYRCSTNNPLLNNLGNVCINCR
QPFVFSASSYEVLHLVEFYLEEGITDEEAVALIDLEAPRLNKREDKWQEMASDGAQTLRF
DDNTDIIEEDDPFTAKLSFEQGGSEFVPVIVNRAVLRSMSRRDVLIKRWPKPLQWQYFRS
LLPDASITMCPTCFQMFHSEDYELLVLQHNCCPYCRRRIDESNQ
NT seq
3555 nt
NT seq
+upstream
nt +downstream
nt
atgagggctgcactgacctggagggataaggccgagcaatgtatatatgatcttgccttt
aaacctgatggaactcagctgataattgcagcaggaaacagattgctggtgtatgaaaca
tctgatggaaccttaattcagcccttgaaagggcacaaggacacggtgtactgtgtggct
tatgctaaagatggcaaacgttttgcatctggctctgctgacaaaagtgtaataatttgg
acttcaaagttagaaggaattctgaaatacacgcataatgattctatacagtgtgtttca
tacaatcctgttactcaccaactggcatcctgctcctccagtgattttggcttgtggtct
cctgagcagaagtcagtctccaaacataaatcaagcagtaaaatcacctgctgtagctgg
acaaatgatggccaataccttgctttggggatgttcaatggcattgtcagcataaggaat
aaaaatggtgaagagaaagtcaaaatagaacgtccaggcggctctttatctccagtatgg
tcaatttgctggaatccatcaagagatgagcacaatgacatcttagctgtagcagactgg
ggtcaaagactttccttttttcagctcagtggcaaacagattgggaaggacagggtgctg
aattttgacccctgctgtattagctatttttccaaaggagaatatatattaatgggaggc
tcagataagcaagtgtctctctacacgaaggatggagtgcgtctcggtaccataggggat
cagagcagctgggtgtggacatgtaaagttaaaccagactctaattatgtggcgataggg
tgccaggatggaacaatttccttttatcagctgatattcagtacagtccatggactctat
aaagatcgttatgcttacagggacagcatgactgatgttattgtccagcacctaattact
gagcaaaaagttagaataaaatgcagagagcttgtaaagaaaattgcaatctacaaaaac
agattagcaatccagctgccagagaaaatcctgatttatgaattatattcagatgactcc
tcagacatgcattaccgtgtgaaggaaaagatagcaaagaaatttgaatgcaacttgctg
gttgtatgttcagatcacattatcttatgccaggagaaaagactacagtgcctctcattt
aatggtgttaaagagcgggagtggctgatggagtcgctcattcgttacattaaagtaatt
ggaggcccttcaggaagagaaggcctcttagtaggtctgaagaatggccagattctgaag
atatttgtggacaatctttttgcaattgtcctgttgaagcaatccacagctgtgcgctgt
ctggatatgagtgcatcccgaaacaagttggcagtggtagatgaaaatgacacctgtcta
gtatatgatattcacaccaaagagctgttgttccaggaacccaatgctaatagtgtggct
tggaatacacagtgtgaggatatgctttgcttttccggagggggttacctcaacatcaaa
gctagtaactttcctgtccatcagcaaaaacttcaaggctttgtggtgggatacaatggc
tccaagattttctgtcttcatgttttttctatgtcagctgttgaagttcctcagtctgct
cctatgtatcaatacctggaacggaaaatgttcaaagaagcctatcagattgcttgttta
ggagtaactgacactgactggaaagagctggctatggaggccttggaaggtctggagttt
gaaactgctaaaaaggcatttaccagagtacgagatcttcggtatctagaactgatcagc
agcattgaggagaggaagaagcgtggagagagtaacaatgagctatttctagcagatgtt
tatgcctacaagggaaaattccatgaggcagctaaactctacagaaagagtggacatgag
agcctcgctcttgatatgtacactgatttacgcatgtttgaatatgcaaaggatttcctt
gggtccggagatcccaaagacactaagatgctaattacaaaacaagcagactgggccaag
aatatcaatgaaccaaaagcagcagtggagatgtacatttctgcaggcgagcacatgaag
gccatagaaatcagtggagaccatggctgggttgatatgttaattgatatagctcggaaa
ttggataaagctgagcgcgaacctttgtcaaaatgtgcttactattttaagagacttgac
aaccatggttatgcagcagaaacctacatgaagataggtgacctaaaggccctggtacat
ctccacgtgaaaactcagcgttgggaagaagcctttgctttgagcgaaaagcatcctgaa
tttaaagatgatgtctatgtcccttatgctcagtggctggcagagaatgatagatttgaa
gaggcccaaaaagcattccacaaggctggcagacagagtgaggccgtaaaagtgcttgaa
cagctaactcgcaatgctgtggtagaaagccgatttaatgacgcagcgtattattactgg
atgctctccatgcagtgtttagatatagcccaagagaacgaacagcagaagactgaaatg
ttacagaagtttcaccacttccagcacttggcagaactttatcacgtctatcactctatt
cacagatacactgaagagcccttcagtttccatttgcctgaaacactcttcaatatttcc
aggtttttacttcacagcctaaccaaggagactccgttgggcatctctaaagtcaataca
ttatttgcactagcaaagcagagtaaagctctgggtgcatataaattggcccgtcatgcc
tatgacaaattgcagggactgcagatcccagttagatttcaaaaatcaattgagctgggc
agcctgacaattcgatccaagccattccatgacagtgaagagcttgtgcccttgtgttat
aggtgctccaccaacaaccccttgctaaataatctggggaatgtgtgcattaactgcaga
cagcccttcgtcttctctgcttcatcttatgaagtattgcatctggtggagttctatttg
gaagaagggatcactgatgaagaagctgtagctcttattgatctggaagcaccaaggtta
aataagagagaggataaatggcaagagatggcaagtgatggagcacagacgctgagattt
gatgacaacaccgacattatcgaagaggatgatccctttacagcaaaattgagctttgag
caaggaggctcagaatttgttcctgtgatagtgaatcgtgctgttctccggtcaatgagc
cggagggatgtcctgattaaacgctggccaaagccattacagtggcagtacttccggtcc
ttgctaccagatgcttccattaccatgtgtccaacatgctttcagatgtttcattcagag
gattatgagctcctggtgctccagcataactgttgtccatactgtcggagaagaattgat
gagtcaaaccagtga
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integrated database retrieval system