Dermochelys coriacea (leatherback sea turtle): 119859224
Help
Entry
119859224 CDS
T09064
Symbol
PCDH15
Name
(RefSeq) protocadherin-15 isoform X4
KO
K16500
protocadherin-15
Organism
dcc
Dermochelys coriacea (leatherback sea turtle)
Brite
KEGG Orthology (KO) [BR:
dcc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
dcc03037
]
119859224 (PCDH15)
04515 Cell adhesion molecules [BR:
dcc04515
]
119859224 (PCDH15)
Cilium and associated proteins [BR:
dcc03037
]
Primary cilia and associated proteins
USH complex and associated proteins
119859224 (PCDH15)
Cell adhesion molecules [BR:
dcc04515
]
Cadherins
Protocadherins
119859224 (PCDH15)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
PCDH15_12th
ECD
Cadherin_CELSR2_9th
Motif
Other DBs
NCBI-GeneID:
119859224
NCBI-ProteinID:
XP_038266991
LinkDB
All DBs
Position
7:88724050..89535888
Genome browser
AA seq
2255 aa
AA seq
DB search
MLQQFCLWEWLAIGITIATVFTNCLAQNDDDCKLARAGPPATIVPIDEESRNGTILVDSM
LIKGTAGGTDPTIELSLKDNIDYWVILDPISQRLYLNSTGRLLDRDPPMSIQSIVVQVQC
INKKVGTVIYHEVRIVVRDRNDNSPRFQKQRYYVAVNELTPVGTTIFTGFSGNNGAMDID
DGPNGQIEYVIQYNPNDPTSNRTFDIPLTLSGAVVLRERLNYEEKTHYFVVVQANDRAQN
LNERRTSTTTLTVDVLDGDDLGPMFLPCVLVNNTRDCMPLTYQASLPEFTDPTQVNPINV
TPPIEAIDQDKNIQPPSDRPRILYSILLGTPEDYPQYFCMNLTTAVLSLLKPINRDLHQK
FDLVIKAEQDNGHPLPAFANLHIEVLDENNQKPYFTESLYEGFILESSPVGTTISDNQNS
TSPLEIIALDKDVEETKDPQLHLFLNDYNTFFTVTQTGITRYLTLLQPVDRELQQLYTFS
MIASDGVQESTAVMVSILVIDANDNSPTFSNISYNVKIYTDMRPGESIIQLSAIDADQGP
NGQIMYGILAGDQGDFIINDRTGLITIAPGVVLSVGRSYALTVKASDSAPPAQRRSSITT
VYIEVLPPNNQSPPRFPQQMYSLEISEAMRIGAILLNLQATDREGDLIRYLIQNGDPQHV
FNLSETSGLLALGKPLDRESTDRYILIVTASDGRPDGTSTATVNVVVTDVNDNGPVFDPF
LPKNLSVREEEVNAFVGQVRATDPDAAVNGQVHYSLVNFNNIFRITSNGSIYTAVKLNRE
TRDYYELTVEATDGAVDPRRSTLTLAIKVLDVDDNSPMFTNASYTVCVPETLPLGTVFLR
IEAKDVDLGSNVTYQIRTQEALPFFSLNKFTGELSLLKSLDYESFSGTEATFTFLVEAFD
SGGTMPPGLATVTVKVKDMNDYSPVFSKVLYRGLVAPDAIKGTVIATVSAEDQDPPGTPA
SRVRYKVDVIQFPYSASIFDVEENSGRVVTRVNLNEEPSTIFKLVVIAFDDGDPVKFNTT
TVEIAVLQPSVIPRFTQDEYRPPPVSEGAPKGTPIAVVTAAALNRTIVYSIVSGNEDDVF
DINNRTGVIFIKKPLDYESVKSYELWVQADSLQVVRSNLRVPSKSNTAKVFIEVQDENDH
APVFTKKLYIGGVSEDARMFSSVLKVKADDKDTGNYSAMQYRLIIPPIKDGKEGFVIEAY
EGLIKTAMLFKNMRRSYFKFQVIATDNYGKGLSSKSEVLVSVVNQLDMQVIVSNVPPTLV
EQNKDQLIGILERYVQDQIPGAKVVVESIGARRFGDGFSEEDYSKSDLMVYAIDPQTNRA
IMRNELFKFLDGKLLDINKEFQPYLGQGGRILEIRTPDVVANVKKQAQAVGYTEGALLAL
AVIIILCCMPAILIVMVSYRQFKERQAECAKTARIQMALPAGKPSSSAANNLYEELGDST
MRGYAQQEQQQLLRPSLLRPEELSVESGIDPGQEYYGQDYYSYEHGYELPQYGSRRRLLS
PTGMYDEYGEVVVENDGSYYYSPHGSTTEGEGMSRGKGPTGRGISQRAEHQIEGSALGGG
MCLRDGSGREHRTSQGKRKLKAVMQLSRIAAKAHKREGTTESAHSPWKKAKIFPMILQKV
KGSSKDSNYSKLMSARPVDSEDSMIIKGSYFQKSADDRPSTTRKLSHVLKRVSVSKKFQK
HSKSQSSVSKSSVSASEKGGEDSESQRVSESEQDETKSGISINITAETEPEDSNISDDYD
KKKKRKSAASDEDESSARSSISASQADDKDYLKVTLDQDETNESTVDSDEEKEEGLQDSE
DDHFVSKSDNEQEESDDISEHSEEEEDEEESKSVLSQVSHSQNKLSDSDEDDFQSKESPN
QSSYSRSECSDSNSRRVSERTSMSSKGSKSSGGTRDSSHRSEVMNSDSEVSSKGSVSERN
KSSGKSSGSSYKNKMSTVGSEIEDTIEEISEEDEKSNLEQDDTSPDEAGDNISDRTMSET
SSISQKTTSSKQSKIRKSDISAGGSMAESTKEIDTDAKDMEETLSRCESKSLESENSVTS
KGSRGRKSSVSATFSSKTDASQESDFQSSDSKWARKKRIKLVVDPEYETSSTGEDSAPEC
QRNRLNNPNIQSNVNGNIYIAHNGSVVRTRRICLSNNLKVTSPVRLGKHFKKLDKLAVTH
EENVPLNTLSKGASSSDKLNTRPSSVSFASTGRGTDNIATKSGGNKMKSTEEQESVVDNE
DVREPLESHSDHTHSDEEELWMGPWNNLHIPMTKL
NT seq
6768 nt
NT seq
+upstream
nt +downstream
nt
atgttacagcagttctgtctgtgggaatggttggctataggaattacgattgctactgtc
ttcaccaattgtttggcccagaatgatgatgactgcaagttggccagggcaggtcctcca
gccacaatagttcccattgacgaagaaagccgaaatggcactatcctagtggacagtatg
ctgataaaagggacagcaggagggactgaccccactattgaactatcattgaaggacaac
atagattactgggtgattctggatcccatcagtcagaggctgtacctaaacagtactgga
cgacttctggacagagatccaccaatgtcgattcaatccattgttgttcaagtgcagtgc
attaacaaaaaagtgggcaccgttatctaccacgaagtacggattgtggtgagggacagg
aatgataactcccctcgttttcagaagcagcggtactatgtggcagtaaatgagttaaca
ccagttggaaccacaatcttcacaggattctctgggaacaatggtgccatggacatagat
gatggtcccaatggccagatagaatatgtcatccagtacaatcctaatgatccgacatcc
aacaggacctttgacattcctctcactttgtctggagcagtagttttacgggagagacta
aattatgaagaaaagacgcattattttgttgttgttcaagcaaatgaccgggctcaaaat
cttaatgagcgaagaacaagtacaaccaccctcacagttgatgtgcttgatggggatgat
cttggaccaatgtttctcccttgtgtcttagtgaataacactcgggactgtatgccactc
acctaccaagccagcttaccagagttcactgatcctacacaagtgaaccccatcaatgtc
actccaccaatagaagctatagatcaagacaaaaacatccagcctccttctgatcgacca
cgcatcctctattccatcctacttgggactcctgaggattatccacaatacttctgtatg
aatctcacaacagctgtactcagtctgctaaagccaataaacagggatttgcaccagaaa
tttgatttggttattaaggcagaacaagacaatggtcatccacttcctgcctttgccaat
ttacatattgaagtcctggatgagaacaatcagaagccttacttcacagaatctttatat
gaggggtttattctggagtcctccccagtgggcacaaccatctctgacaaccagaattcg
acttctccactagaaattatagctttggacaaggatgtagaagagacaaaggatccacag
ctccatcttttcctaaatgattataatacatttttcactgtgactcagactggtataacc
cgttacctcaccttactccaaccagttgatagagagctccagcagctatacaccttctcg
atgatagcttctgatggtgtacaggaaagtaccgcagttatggtcagtatcctggtgatt
gatgccaatgataactcaccaaccttctccaacatatcatacaatgtcaagatttataca
gacatgaggcctggggaaagcattatacagctcagtgccatagacgcagaccaagggcca
aatgggcagatcatgtatggaattctggctggggaccagggagacttcatcattaatgat
cgaacgggccttatcaccatcgctccaggagttgtattgtcagtagggaggtcctatgct
ctcactgtcaaagcatctgacagtgctcctcctgcacagagaaggagctccatcactact
gtttacattgaggtacttcctccaaacaatcagagccctccccgttttccccagcagatg
tacagtcttgaaatcagtgaggccatgagaattggtgccattttgttaaacctgcaggcc
actgatcgagagggtgacctgataagatacctcatccaaaatggagatcctcaacatgtt
tttaatctctctgaaacttctggacttcttgccttaggaaagcccttggacagagaaagc
actgatcgctacattttgattgttacagcctcggatggcagaccagatgggacctcaact
gccactgttaatgtggtggtgactgatgtaaatgacaatggaccagtctttgatcccttt
ctacctaaaaatctatctgtacgcgaagaggaagtgaatgcttttgtcgggcaagtgagg
gctacagaccctgatgctgcagtaaatggccaagtacactacagcttggtaaacttcaac
aacattttccgcatcacatcaaatggtagcatttacacagcagttaaactgaacagagaa
acaagggactattatgaacttactgttgaagcaacagatggagctgtggacccccgccgt
tcaacattaactctggcaatcaaagttctggatgttgatgacaacagccctatgttcact
aatgcctcctacactgtctgtgttccagaaactctaccacttggcacagtcttcctgcga
atagaggcaaaggatgttgaccttggttcaaatgttacctatcagatacgaacccaggaa
gcactgccatttttttcattgaacaagtttacaggagaattatcacttttaaaatccttg
gattatgagtcattctctggcactgaggcaaccttcacctttctagtggaagcctttgat
agtggaggaactatgcctccaggacttgctactgtcactgtgaaagtaaaggatatgaat
gattactccccagtatttagcaaagttctctacaggggactggttgctcctgatgcaatc
aagggcactgttatcgctacagtttcagctgaagatcaggatcctccgggtacaccagca
agtcgtgtaaggtacaaagtagatgtcatccagttcccttacagtgccagcatttttgat
gtagaggaaaattcaggacgtgtagtaactcgagtaaatcttaatgaagagcccagtaca
atatttaagctagtggttattgcatttgatgatggtgatcctgtgaagttcaataccacc
actgtagaaattgctgtattgcaaccctcagtaattccacgatttacccaggatgaatac
agacccccgccagtgagtgaaggtgcacccaaaggaactccgattgctgtcgtaactgct
gctgccttgaatcggactattgtatattcaattgtttcaggaaacgaagatgatgtgttt
gacattaataacagaactggtgttatcttcattaaaaagcctcttgactatgaaagtgtg
aaaagctatgaactttgggtacaagcagactcactacaagtggttcgatccaatctacgt
gttccttccaaaagtaacacagccaaggtgtttattgaagtgcaggatgaaaatgaccat
gctcctgtttttaccaaaaaactctacattggaggagtgtctgaagatgctagaatgttt
tcttctgtgctgaaagttaaggctgatgataaagacactggaaattacagtgccatgcag
tacagactcatcatacccccaatcaaggatggcaaagaaggttttgtgatcgaagcctat
gaagggcttataaaaactgccatgctgttcaaaaatatgagaaggtcctatttcaagttt
caggtcattgcaactgacaattatgggaaaggactgagcagcaaatccgaagtacttgtc
tctgtggtcaatcagttggatatgcaagtcatcgtttctaatgttcctcccactcttgtg
gaacaaaacaaagatcaacttatagggattttggaacgctatgttcaagatcagattcct
ggtgcaaaggttgtggtagagtccattggggcccgcagatttggagatggcttttcagaa
gaggattactccaaatctgacttgatggtctatgcaattgaccctcaaacaaaccgagct
ataatgaggaatgaactttttaagttcttggatggaaaactgctggatatcaataaagaa
tttcagccataccttgggcaaggaggacgtattctggaaatccgcaccccagatgttgtg
gccaatgttaagaagcaggcacaagctgtaggctacacagaaggggcattgcttgctttg
gctgtcataatcatcctttgctgcatgcctgctattttaatagttatggtcagctacaga
caatttaaagagcggcaagctgaatgtgcaaagacagcaagaatccagatggccttacca
gccggcaaaccatcaagtagcgctgccaataatctctatgaagaactcggtgacagcacc
atgcgaggatatgcacagcaagagcaacagcaattgctgagaccctctcttctcagacca
gaggagttgtctgtggaatccggaattgatccaggccaagaatactatgggcaagattac
tacagttatgaacatgggtatgaattgcctcaatatgggagtcgtcgccgattgttatct
ccaactggaatgtatgatgagtatggtgaagtggttgtggaaaacgacggcagctattat
tacagtccacatggatcaacaactgaaggagaagggatgagtcgaggtaaaggtcctaca
ggcagaggtataagccagagagcagagcatcaaatagaaggtagtgctttaggtggtggg
atgtgtctaagagatggttctggaagagaacataggaccagccaggggaaaaggaaacta
aaagcagtgatgcagttgagtcgaatagccgcaaaagcccacaaacgagaaggaacaact
gagtctgctcattctccatggaagaaagcaaagatatttccaatgattctgcagaaagta
aaaggcagtagcaaagattccaattattccaagctgatgtcagctcgtccagtggacagt
gaagacagcatgattatcaaaggaagttatttccagaaatcagcagatgacagaccttca
acaaccagaaaattaagtcatgtgctaaaacgcgttagtgtttccaaaaaatttcaaaag
catagcaaatctcagagctctgttagcaaaagttcagtatctgcaagtgaaaaaggaggg
gaagactctgaaagtcagagggtgagtgaatctgaacaagatgaaacaaaatcaggaatt
tcaattaatatcacagcagaaactgagccagaggatagtaatatttctgatgactatgat
aagaagaaaaaaagaaaatctgctgcttcagatgaagatgaatcatcagcaaggagtagt
atctctgcctctcaggcagatgataaagactatttgaaagtgacactggaccaagatgaa
accaatgaaagtactgtggactctgatgaagagaaggaggaaggtttacaggattcagaa
gatgatcattttgtatccaaatcagataatgaacaggaggaatcagatgacatatctgag
cactctgaagaggaagaagatgaagaagagtcaaaaagtgttctttctcaagtctctcat
tctcagaataaactctctgacagtgatgaagatgacttccagtcaaaggaatctccaaat
cagagttcctatagcagatctgagtgtagtgattccaatagcagaagagttagtgaaaga
actagtatgtcaagtaagggaagtaagtctagtggaggaacaagggattccagccacagg
tcagaagtgatgaattctgacagtgaagttagctctaagggatcagtcagtgaaagaaac
aaaagttctggaaagagttctggatccagctacaagaacaaaatgtccacagttggcagt
gaaatagaagacacaatagaggagatatcagaggaagatgaaaaatcaaatttggagcaa
gatgatacaagccctgatgaggcaggtgacaatataagtgataggactatgtctgaaaca
tcttccatcagtcaaaaaactacttccagtaaacagagcaagataagaaaatcagatatt
agtgctggaggtagcatggctgaaagcacaaaagagattgatacagatgctaaggatatg
gaagaaactctcagtaggtgtgaatcaaaaagccttgaaagtgaaaatagtgtcacttcc
aaaggcagcagagggagaaagagctcagtgagtgccactttttctagtaaaacggatgct
tcccaagaatcagattttcaaagttctgattccaagtgggccagaaagaaaaggatcaag
ttagtagttgatccagaatatgagaccagctcaactggagaagacagtgctccagaatgc
cagaggaatcgtcttaacaaccccaatattcaaagcaatgtaaatggcaacatctatatt
gcgcataatgggtcagttgtgagaacccgtcgcatttgtctctccaataatttaaaagtc
acatcccctgttagattggggaaacactttaagaaattggataaactagcagtgacacat
gaggagaatgtcccattgaacacattgtcaaaaggggcatcttctagtgacaaactgaac
acaagaccatctagtgtctcatttgcctccactggtagagggactgacaacattgcaaca
aagtctggaggcaacaaaatgaaaagcacagaagagcaagagtctgttgttgataatgag
gatgtcagagagcccttggaatcacacagcgatcacacacactcagatgaagaggagctc
tggatgggcccttggaataaccttcacataccaatgacaaaactgtga
DBGET
integrated database retrieval system
