Dermochelys coriacea (leatherback sea turtle): 119860427
Help
Entry
119860427 CDS
T09064
Symbol
PDGFRB
Name
(RefSeq) platelet-derived growth factor receptor beta
KO
K05089
platelet-derived growth factor receptor beta [EC:
2.7.10.1
]
Organism
dcc
Dermochelys coriacea (leatherback sea turtle)
Pathway
dcc04010
MAPK signaling pathway
dcc04020
Calcium signaling pathway
dcc04510
Focal adhesion
dcc04518
Integrin signaling
dcc04540
Gap junction
dcc04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
dcc00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
119860427 (PDGFRB)
04020 Calcium signaling pathway
119860427 (PDGFRB)
09133 Signaling molecules and interaction
04518 Integrin signaling
119860427 (PDGFRB)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
119860427 (PDGFRB)
04540 Gap junction
119860427 (PDGFRB)
09142 Cell motility
04810 Regulation of actin cytoskeleton
119860427 (PDGFRB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
dcc01001
]
119860427 (PDGFRB)
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
dcc04090
]
119860427 (PDGFRB)
Enzymes [BR:
dcc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.10 Protein-tyrosine kinases
2.7.10.1 receptor protein-tyrosine kinase
119860427 (PDGFRB)
Protein kinases [BR:
dcc01001
]
Receptor tyrosine kinases (RTK)
PDGFR family [OT]
119860427 (PDGFRB)
CD molecules [BR:
dcc04090
]
Proteins
119860427 (PDGFRB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
Ig_PDGFR_d4
Pkinase
Ig_3
I-set
ig
Ig_2
V-set
VEGFR1-3_N_Ig-like
VEGFR-1-like_Ig-like
C1-set
DUF5592
Motif
Other DBs
NCBI-GeneID:
119860427
NCBI-ProteinID:
XP_038270068
LinkDB
All DBs
Position
8:7144898..7209766
Genome browser
AA seq
1101 aa
AA seq
DB search
MRPAVQLNPTMLLPALKMFLLFLAGLPAAVSGSSKLHISPSDPEVILSLLSNFSLTCSGE
AEVVWERDTQPIAASPEWRDGTFSSMLTLWNVTGLDTGEYACTYNQSQNQKHVERQAVYV
FVPDSSLVFLPTTSEESFIFITGNSEATIPCRVTDPQATVTLYERKVENPIPAVYDRQQG
FKGFFEDKTYICRARLDEREADSEAYYVYRIQVSSLNVSISAVQTVVKRGENITVMCTVS
GNEVVDFSWFYPRQEAGKAVEPVMAFLPGSSHDIRSTVTIQNAELEDAGTYICHVSEVYL
QNMDKKDIEVNVIERGFVRFHTGLYNVELAEVHKSRTLQVQIEAYPQPTILWLKDNETLW
VGNSSEFAITSKNLSETRYQTTLTLVRVKQKEGGFYTVRASHEDDTQELSFYLQINVPAN
VLSLKENSNASSGEQTVTCSTEGMPQPELRWFTCSDIKGCGTKEQPTRVLENNSEEINLQ
TISTYHETLKVYRVNSTLWLRRVDEPLLIRCSVQNLLGSNFQDITLVSHALPFKMIIISV
ILALVVVLAVIFLVILIILWLKKPRYEIRWKVIESVSSDGHEYIYVDPMQLPYDCSWELS
RDKLVLGRTLGSGAFGRVVEATAHGLSHSQSMMRVAVKMLKSTARTSEKQALMSELKIMS
HLGPHLNIVNLLGACTKGGPIYIITEYCRYGDLVDYLLRNKHTFLQYYTEKARREMEVYG
NASEEDKVYSLTSFSVESDGGYMDMSKDDSLDYVPMSDMKGEIKYADIESSNYGTPYELD
SYSPSAPERTDRVTLINESPLLSYTDLVGFSFQVANGMEFLASKNCVHRDLAARNVLICE
GKLVKICDFGLARDIMRDSNYISKGSTFLPLKWMAPESIFNNLYTTLSDVWSFGILLWEI
FTLGGTPYPELPMNEQFYNAIKCGYRMSKPTHASNEIYDIMQKCWEEKFEIRPSFSQLVV
LMGNLLADGYKKRYQQVEEEFLKSDHPAVLRTRPRIPGVSSAGPTPSSGTGSVLYTAVQQ
DGGDNDYIIPLPDPKPDGIDDAPQEASVSRASSTLNEVNTASTISCDSPLDLQQEGEQEP
EPKSGCQEPSPGHHDMEESFL
NT seq
3306 nt
NT seq
+upstream
nt +downstream
nt
atgcggcctgcagtgcagctgaaccccaccatgctccttccagctctgaagatgttcctc
ctcttccttgcaggtttgccagctgcagtgtctggaagcagcaagctgcacatttcaccc
agtgaccccgaagtcatcctcagtctcttgagcaacttctcactgacatgctcgggggag
gccgaggtggtctgggaacgggacacgcagcccatagccgcatcaccggagtggagagac
ggcaccttctccagcatgctcacgctctggaacgtgacaggccttgacacgggggagtat
gcctgcacctacaaccaatcccagaaccagaagcacgtggaaagacaggctgtctatgtc
tttgtgccagactcctccttggtcttcctccccacaacctccgaggaatcattcatcttc
atcaccggcaacagcgaggccaccatcccgtgccgcgtcactgacccccaggccacggtg
actctctatgagaggaaggtggagaacccaattcccgcagtctatgacaggcaacaaggc
ttcaaggggttcttcgaagacaagacctacatctgccgggcaaggctggatgagcgggag
gcagactctgaggcgtattatgtctacagaatccaggtctcgtccctcaatgtttccatc
agcgcagtgcagaccgtggtgaagcgaggcgagaacatcaccgtgatgtgcactgtaagc
ggcaacgaagtggtcgatttcagctggttttaccctcgccaggaggcaggtaaggccgtg
gagcctgtgatggccttcttgcctggatccagccatgacatccgctccaccgtgaccatc
cagaacgcagagctggaggacgccggcacctacatctgccacgtctccgaggtctacctc
cagaatatggacaagaaggacattgaggtcaacgtgatcgagcgcggctttgtgaggttc
cacactggtctgtacaacgtcgagttggccgaggtgcacaagagtcgcaccctccaggtg
cagatcgaggcctatccacagccaaccatcctgtggctgaaggacaatgagactctgtgg
gtggggaacagcagcgaattcgccatcaccagcaagaacctctcggaaacgaggtaccaa
accactctgaccctggtgcgggtgaagcagaaagaagggggattctacaccgtccgggca
tcccatgaggatgacacgcaggagctgtccttctacctgcaaattaacgtacccgccaac
gtgttgtcgctgaaggagaacagcaatgccagcagtggggagcagacggtcacgtgctcc
actgaagggatgccccagccggagctcaggtggttcacctgcagcgacatcaaagggtgc
ggcaccaaggagcagcccaccagggtcctggagaacaactcagaggagatcaacctgcag
accatctccacgtaccacgagacactgaaggtttacagagtgaacagcacgctgtggctc
cgcagggtggacgaacccctgctcatcagatgctctgtgcagaacctcctgggcagcaac
tttcaggacatcaccctggtctcacacgctttgccctttaagatgatcatcatctcagtc
attctggccttggtggtggtgcttgccgtcatcttcctggtgatcctcatcatcctgtgg
ctgaagaagcctcgctatgaaatccgttggaaggtgattgagtcggtcagctctgacgga
catgagtacatctacgtggatccgatgcagctcccctacgactgcagctgggagctctcc
agggacaagttagtgctaggtcgcactctcggatccggagcctttggccgagtggtggag
gcaacagcccatggcctgagccattcgcaatccatgatgcgagtggccgtgaaaatgctc
aaatccaccgccaggaccagcgagaagcaggccctgatgtctgagctgaagatcatgagc
cacctgggacctcacctaaacattgtcaacttgcttggagcctgcaccaaaggaggcccc
atctatatcataacagagtattgccgctatggagacctcgtggactatctgctccggaac
aagcacacctttctccagtactacaccgagaaagcaaggcgagagatggaggtgtatggg
aatgcctccgaagaggacaaggtgtacagcctcacctccttttctgttgaaagcgacgga
ggctacatggatatgagcaaggatgactccctggactacgttcccatgtctgatatgaag
ggagagatcaagtatgctgacattgagtcctccaactacggcaccccctacgagctggac
agctattccccctcagctcccgaaaggacggatcgtgtgaccctgataaacgagtccccg
ctcctcagctacacagacctggttgggtttagtttccaggtggccaacgggatggagttc
ctcgcatccaaaaactgtgtgcaccgagacctggcagcaaggaacgtcctcatctgcgag
gggaagctggtgaagatctgtgactttggcctggccagagatatcatgagagattccaac
tacatctccaaaggcagcaccttcctgcctttgaaatggatggcgcctgagagcatcttc
aacaacctctacacaaccctgagtgatgtgtggtcttttgggatccttctctgggagata
ttcactctgggtgggactccataccctgaactacccatgaatgagcagttctacaatgcc
atcaaatgtggctatcgaatgtctaaacccacccatgcttccaacgagatctatgacatc
atgcagaaatgttgggaagagaagtttgagataagaccttccttctctcaactggtggta
cttatggggaacctcctggcagatggatacaagaagaggtaccaacaggttgaggaggaa
ttcctgaagagcgaccaccctgctgttctgcgcaccaggcccagaatcccaggggtcagc
agcgccgggcccacccccagctccggcaccggaagtgtcctgtatacagctgtgcagcag
gatgggggggacaacgattacatcatccccctccctgatcccaagcccgacggaatcgat
gacgcccctcaggaggcttctgtcagccgggccagttctactctgaatgaagtgaacaca
gcgtccacaatatcctgtgacagtcccctggacctacagcaggaaggggaacaggaaccc
gaaccaaagtcgggctgccaggagccaagcccagggcaccacgacatggaagaaagtttt
ctgtag
DBGET
integrated database retrieval system
