Dietzia cinnamea: VYL96_06280
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Entry
VYL96_06280 CDS
T10417
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
dcd Dietzia cinnamea
Pathway
dcd00300
Lysine biosynthesis
dcd00550
Peptidoglycan biosynthesis
dcd01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
dcd00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
VYL96_06280
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
VYL96_06280
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
dcd01011
]
VYL96_06280
Enzymes [BR:
dcd01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
VYL96_06280
Peptidoglycan biosynthesis and degradation proteins [BR:
dcd01011
]
Precursor biosynthesis
Amino acid ligase
VYL96_06280
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
Motif
Other DBs
NCBI-ProteinID:
WVF64658
LinkDB
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Position
1374253..1375812
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AA seq
519 aa
AA seq
DB search
MTTARQLADAVGARLLGDRSGADVDLTGATIRAQDCGPGILFAALPGTRIHGASFGATAV
EAGASAVLTDPEGIELMAAVAGRLPVLVHPAPRAVLGAVSAAVTGDPSADLDVVGITGTS
GKTTTTYLVEAALEGCGHVAGLIGTTGSRVDGRALPSRLTTPEAPEFQALLARMRAAGAR
AVAAEVSSHALRLGRVDGVRFAVGAFLNLSQDHLDFHPSMDDYFRAKARLFDVEADPGSA
VWPAERAVVVIDDEWGRRLVGMRPDAVTVSAEPDADADWTAGESTPTDRDTQEFTVHGPR
GLAVDVELPLMGRFNVANALVALAIVDALGGDVAAAAAGLMRVRVPGRLEPVVRGQDFRV
LVDYAHKPGAVAAVLRSVRAQTEGRVAVVLGAGGDRDPGKRPKMGAAAAEIADLVVVTDD
NPRSEDPAAIRAAVRAGAEQAAGPDTRVEEVGDRGAAIATAIDWARAGDVVVIAGKGHET
GQEVAGVVHPFDDRARAAEELVRRLGYRAPTGETEDSTP
NT seq
1560 nt
NT seq
+upstream
nt +downstream
nt
atgaccacggcgcgacagctggcagatgcggtgggggccaggctcctcggcgacaggtcc
ggggccgacgtcgacctcaccggggcgaccatccgggcccaggactgcggcccgggtatc
ctcttcgccgccctgcccggaacccgcatccacggcgcctcgttcggggccaccgccgtc
gaggcgggcgcatccgcggtgctcaccgaccccgagggcatcgagctgatggccgccgtc
gccgggcgcctgcccgtcctcgtccaccccgccccgcgcgcggttctcggcgcggtgtcc
gcggcggtgaccggagacccgtccgccgacctcgacgtcgtcggcatcaccggcacctcc
ggcaagaccaccaccacctacctcgtcgaggccgccctcgagggctgcgggcacgtcgcc
ggtctcatcggcaccaccggcagccgcgtggacggccgcgccctgcccagccggctcacc
acccccgaggcacccgagttccaggccctgctcgcccggatgcgagccgcgggggcacgc
gccgtcgcggcggaggtctccagccacgccctgcggctcggccgggtggacggcgtccgg
ttcgccgtgggcgcgttcctcaacctgtcgcaggaccacctggacttccacccgagcatg
gacgactacttccgcgccaaggcgcggctgttcgacgtcgaggcggacccgggctcggcg
gtgtggccggccgagcgcgcggtcgtggtgatcgacgacgagtggggccgccgcctggtg
gggatgcgcccggacgcggtaaccgtgtccgccgagcccgacgccgacgccgactggacg
gccggggagtccaccccgaccgaccgcgacacccaggagttcaccgtccacgggccccgc
gggctggccgtggacgtcgagctcccgctgatgggtcggttcaacgtcgccaacgcgctc
gtggcgctggcgatcgtcgacgccctgggcggggacgtcgccgcagccgcggccggactc
atgcgggtgcgggtgcccggccgcctcgagccggtcgtgcgcggccaggacttccgcgtc
ctcgtggactacgcccacaagccgggcgcggtcgccgcggtcctgcgctccgtccgcgcg
cagaccgagggccgtgtggccgtggtcctcggcgccgggggcgaccgcgacccgggtaag
cgccccaagatgggggccgccgcggccgagatcgccgacctcgtggtggtgaccgacgac
aacccccgcagcgaggaccccgccgccatccgcgccgccgtccgcgcgggggccgaacag
gccgccgggcccgacacccgcgtcgaggaggtcggcgaccgcggcgccgcgatcgccacc
gcgatcgactgggcccgcgccggcgacgtcgtcgtgatcgccgggaagggacacgagacc
ggtcaggaggtcgccggcgtcgtgcacccgttcgacgaccgggccagggccgcggaagaa
ctcgtcagacgactcggataccgcgcccccacgggcgagacggaggacagcacaccatga
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