Denitrificimonas caeni: O6P33_02735 Help Entry O6P33_02735       CDS       T08709                                  Symbol ligB Name (GenBank) NAD-dependent DNA ligase LigB   KO K01972   DNA ligase (NAD+) [EC:6.5.1.2] Organism dce  Denitrificimonas caeni Pathway dce03030   DNA replication dce03410   Base excision repair dce03420   Nucleotide excision repair dce03430   Mismatch repair Brite KEGG Orthology (KO) [BR:dce00001]  09120 Genetic Information Processing   09124 Replication and repair    03030 DNA replication     O6P33_02735 (ligB)    03410 Base excision repair     O6P33_02735 (ligB)    03420 Nucleotide excision repair     O6P33_02735 (ligB)    03430 Mismatch repair     O6P33_02735 (ligB)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03032 DNA replication proteins [BR:dce03032]     O6P33_02735 (ligB)    03400 DNA repair and recombination proteins [BR:dce03400]     O6P33_02735 (ligB) Enzymes [BR:dce01000]  6. Ligases   6.5  Forming phosphoric-ester bonds    6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)     6.5.1.2  DNA ligase (NAD+)      O6P33_02735 (ligB) DNA replication proteins [BR:dce03032]  Prokaryotic type   DNA Replication Elongation Factors    Elongation factors (bacterial)     Other elongation factors      O6P33_02735 (ligB) DNA repair and recombination proteins [BR:dce03400]  Prokaryotic type   SSBR (single strand breaks repair)    BER (base exicision repair)     DNA ligase      O6P33_02735 (ligB)    NER (nucleotide excision repair)     GGR (global genome repair) factors      O6P33_02735 (ligB)    MMR (mismatch excision repair)     DNA ligase      O6P33_02735 (ligB)   DSBR (double strand breaks repair)    NHEJ (non-homologous end-joining)     SHDIR (short-homology-dependent illegitimate recombination)      RecET pathway       O6P33_02735 (ligB) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  DNA_ligase_aden DNA_ligase_OB RNA_ligase Motif Other DBs NCBI-ProteinID:  WBE25776 UniProt:  A0AAE9VP96 LinkDB All DBs Position complement(563001..564692) Genome browser AA seq 563 aa AA seqDB search MLRTIVSICVGSMMLLINLSAVAACPTWTHTQAEQEISTLQQRLAVWDRSYHRDATSPIA DELYDQARAQLQLWQTCFTPAAAPEPAATALQSARGSQALPFSQMGLSKLSETQLQDWMQ QRADLWAQPKVDGVAVTLVYSHGQLKQVLSRGDGLSGQNWLKHAQAIAAIPKQLATQRKQ ITLQGELYLKQPRHIQQRDGGSSARSQVAGLLNRKQLTTSVGNTIGLFVWEWPDGPTSMP ERLSTLQDLGFNDSGAYSQPIHNLAEAKHWRDYWYRTELPFASDGLVIKQSTRNIQHARS AYPPFWAVALKYPLQQALTSVTDVTFNIGRSGRITPIAHVQAVSLDDKTIRKVSLGSLTR LAKLRLSKGDHVAIALSGHAIPQLKEVVWRSPQRQTIETPHAAHYHALSCWQNSPVCQQQ FLARLHWLGQKNNLAMSGLGLQTWQALVDANYISQLTDWLTLSASDLQQLPNFALKRSQH TAAAFAQAKQQPFQRWLRALGAPASITIKPGDNWHSLAALSVQDWQQQRHLGSTQAHSAW AFFQHPAVQTAALNLQNHDIDGF NT seq 1692 nt NT seq  +upstreamnt  +downstreamnt atgttgcgtactattgtatcaatctgcgttggcagcatgatgctgctgatcaatttatcc gctgtagcggcttgcccaacgtggactcacactcaagccgagcaagaaatcagcacgtta cagcagcgtcttgccgtttgggatcgcagctatcaccgtgacgccacctcgcccattgct gacgaactctacgatcaagcccgcgcacaattacagctctggcaaacgtgctttacccct gctgctgcgccggagccggccgccactgccctgcagtcagcacggggcagtcaagcacta ccttttagccaaatgggtttaagcaagctcagtgaaacccagctacaagactggatgcag caacgtgcagatttatgggcgcaaccaaaagtggatggagtggcagtgaccttggtgtac agccacggccaactcaaacaagtactcagccgtggtgacggtttaagcggacaaaactgg ttaaagcatgctcaagctattgctgcgatccccaagcaactggcaacacaacgcaagcag ataaccctacaaggcgagctgtacttaaaacagccgagacatattcagcagcgtgatggt ggtagcagtgcccgcagccaagttgctgggctgctcaatcgcaagcaactgacaacgagc gttggaaatacaattggtctatttgtttgggagtggcccgatggaccgaccagcatgccc gaacgcttaagcacactgcaggatttaggctttaatgacagcggtgcctatagccaaccc attcacaacttagccgaagctaaacactggcgcgattattggtatcgcacagagctgccc tttgccagtgatggtttagtcattaagcagagtacgcgcaacattcaacatgcgcgcagc gcttatccgccattttgggcggtggcgttaaaatacccgctgcaacaagcgctcacttcg gttaccgatgtcacatttaacattggccgcagtggccgcattacgcctatcgcacatgtg caggcggtcagcctagatgacaaaaccattcgcaaagtgagcctgggttcgctgacccgt ttggcaaaactgcgcttaagcaaaggcgatcatgtggcgattgcgctgtctgggcatgcc attccgcaactgaaagaagtcgtctggcgcagtccacaacggcaaaccatcgaaacaccg catgctgcgcactaccatgctttaagctgctggcaaaacagcccagtctgccaacagcag tttctggcccgcctgcactggctgggccagaagaataatttagccatgtcagggcttggc ctacaaacatggcaagccttagtggatgccaactatattagccagctgactgactggtta acgcttagcgctagtgacttacagcaactacccaactttgccctaaagcgcagccagcac accgctgctgcctttgctcaagccaaacagcagcctttccagcgttggttaagagccttg ggcgcgccagccagtatcactataaaacccggtgacaattggcacagccttgccgccctg agcgttcaggattggcagcaacagcgccacttaggctcgactcaggcgcacagtgcttgg gcattttttcagcacccagcagtacaaactgccgcactaaacttgcaaaaccatgacatt gacggcttttaa

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