Dolichospermum compactum: NIES806_26620
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Entry
NIES806_26620 CDS
T10125
Name
(GenBank) RND family efflux transporter MFP subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
dcm Dolichospermum compactum
Pathway
dcm01501
beta-Lactam resistance
dcm01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
dcm00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
NIES806_26620
01503 Cationic antimicrobial peptide (CAMP) resistance
NIES806_26620
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
dcm03036
]
NIES806_26620
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
dcm02000
]
NIES806_26620
01504 Antimicrobial resistance genes [BR:
dcm01504
]
NIES806_26620
Chromosome and associated proteins [BR:
dcm03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
NIES806_26620
Transporters [BR:
dcm02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
NIES806_26620
Antimicrobial resistance genes [BR:
dcm01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
NIES806_26620
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-barrel_RND_2
BSH_RND
Beta-barrel_YknX
HH_EMRA
CzcB_C
YknX_C
Beta-barrel_AprE
RND-MFP_C
OEP
LcnD_C
DUF3584
BSH_CusB
AIP3
Beta-barrel_RND_rel
BSH_Fcp1
Motif
Other DBs
NCBI-ProteinID:
BAZ86450
UniProt:
A0A1Z4V4I5
LinkDB
All DBs
Position
complement(2804083..2805378)
Genome browser
AA seq
431 aa
AA seq
DB search
MILDIRVLVLAQRIFTPSMLGIALLTASCGSLPKESAKAQSQRPQRANQEPAVDVAIART
NLLNPQPEYIGNTAPLRIVSVRSQVEGRLISLNLDIGDIVQRGKIISQLDDTLLLTAVKQ
AEAQLATTKSEVARAQTQVSNALAQVETARLELVQAEADFRRLTQLYKEGAIAQQNAQQA
QTRARTAAQSLRAATAQVNTEKQAVAAAQGRVFAQKAAVSAAIERRSYSRLISPITGVVT
EKVTEPGNLLQPGSEVLKVADFSRVKVVAQVSELELAKIQVGQSVEVKLDAFPDQKLIGK
VSRISPTADTTARLIPVEIVMDNIGGKIGSGLLARVSFTTQTKPLVVVPETAISSQDKKP
QLENSNSTLFVIEKTDKKTTVKQRPVSLGKIANGKIEILSGLQPGESYVVRSSKPLKDGA
VVKLSMLSEKE
NT seq
1296 nt
NT seq
+upstream
nt +downstream
nt
atgattttggacatcagggtactagtcctagcacaacgtatatttacgccctcaatgtta
ggaatagcgctattgacagccagttgtggttcattgccaaaagaatcagccaaagcacaa
tcccaaagacctcaacgtgctaatcaagaaccggctgtagatgtggcgatcgctcgtact
aatcttttaaacccccaaccagagtatattggtaatactgcccccttgcgaattgtttcc
gtgcgatcgcaagttgaaggcagactcatctcattaaacttagatatcggtgatatagtc
caacgcggtaaaatcatcagtcaattggacgataccctcttactcaccgcagtaaaacaa
gcagaagcacaattagcaaccactaaatcagaagtagccagagcgcagactcaagtaagt
aatgctctcgcccaagtggaaacagccaggctagaattagtccaagcggaggcagatttc
cgcagactaacacaattatacaaagaaggggcgatcgcccaacaaaacgcccaacaggca
caaaccagagcgagaacagccgcccaatccctccgcgctgccaccgcacaagtcaataca
gaaaagcaagctgtagccgccgcccaaggtcgagtatttgcccaaaaagcagccgttagc
gccgccattgaacgccgttcttattctcggttaatttcccccattacaggtgtagtcacc
gaaaaagtcacagaaccaggaaatttattacaacctggtagcgaagttttaaaagttgct
gattttagtcgcgttaaagttgtcgcccaagtttcggaattagaactagcaaaaatccaa
gttgggcaatctgtagaagtcaaattagatgcctttcctgaccaaaaattgataggcaaa
gtatcccgtatttccccaactgctgatactacagcccggttaatccctgtagaaattgtt
atggacaacattggggggaaaattggtagtgggttattagcaagagttagctttaccacc
caaacaaaaccgcttgtagttgtcccagaaaccgcaattagtagtcaagacaaaaaacca
caattagaaaatagtaactctacacttttcgtaattgaaaaaacagataaaaaaaccaca
gttaaacaacgtccagtatctttaggaaaaattgctaacggcaaaatagaaattttatca
ggcttacaaccaggagaaagttatgttgttcgcagcagtaaaccattaaaagatggtgca
gttgttaaattatcaatgttgtcggaaaaggaataa
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