Daucus carota (carrot): 108192748
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Entry
108192748 CDS
T05350
Name
(RefSeq) uncharacterized protein LOC108192748
KO
K13140
integrator complex subunit 3
Organism
dcr
Daucus carota (carrot)
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
dcr03041
]
108192748
Spliceosome [BR:
dcr03041
]
Other splicing related proteins
Proteins involved in snRNP biogenesis
Integrator complex
108192748
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ints3_N
HEAT_Ints3_C
Motif
Other DBs
NCBI-GeneID:
108192748
NCBI-ProteinID:
XP_017227735
LinkDB
All DBs
Position
9:29678887..29683429
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AA seq
971 aa
AA seq
DB search
MGSRLIVGAPHEADNLLETSLREAFELLESQLSPPFSLKCRNELEYFDINKAIIYGILCE
PQMGNVHIKHLHGIVTDGYAFFTNTLVRIVDELYEKLVDSVRVQLIWITLEMIDVSAIGF
QGLLVALLRQIVGGDFSDKNLWLCSELVRIFFAKWDCLLEEESLVLTSALYVFLRLLADH
CRLVGNLKVELLKKMEIDFCVRLLRERFHLCMMIGRDLVRLLQELVHVPEFRAIWKDLML
SPSEFKVPEFRDISQLYRVRTSSRYFLLRITPVMESQLRFLLSDVKFGNHRRYQVWFGKK
FLCTAEKETLLIDIVRFICCSHHPPNEIILSDIIPRWAVIGWLLKCCRKNYVEASVKLAL
FYDWLFFDENMDNVMNIEPAFLLMVNSMSKYIEMTHMLLDFLLLVVNNYDTERRETIVQG
VQSSFDVLVRRGVVQSLDVLISSDKLFPFLKERIVKLLSERKVTSLENLQAGSFRGSTSL
PDHPAAVRMESGTLQHDMSASASQNDVELGPPTNVTSCSPLAENDDIHQQSLESLVQNLG
KHIRSSKQMGMQALDKILHLYVNLSSKAETTNFSISPNQLSSIIAKEFQYSGNQLFEQNW
DQDLQSASAIIIRHFMFSQHETLLGMLLCWNRDGLTVGPCFLAYAINLAHEAHVLGYVTH
PNTVAHPDTLRDSNKTTDSGMSLLKYHCEQYCCFVNKGKDLSQAIISTSSINVKLVTTLI
EGAFAAYRGFNMHRGRELAPNSDNYLPKILYCDLMSYAKQDNRILKFSLYGISSNLRDLF
LCEENIMKSIVSQLDYSDLLDIQFDLGSKKLSIFGDSIEAISHLIRSSFQWECIEQHNFW
GLLRSELAVSEVPKEKVLLEFFCTDGLDPKISSIAVGGLLALCSSLAPTPDLVGAVLLLP
NKIFTNFATTVLSAWAVSNTSMLFTSLAEFMDKINAGDSMIPDLSEIMINNSAFIWLLNF
LDAKRNEKQQL
NT seq
2916 nt
NT seq
+upstream
nt +downstream
nt
atgggttcaagactgattgttggagcaccccacgaagctgataacttgcttgaaacctct
ttaagagaagcgtttgagcttcttgaatctcagttaagtccccccttctcgctaaaatgt
cgtaacgaattggagtattttgatattaacaaggcaattatttatgggattttatgtgaa
ccccagatgggcaatgtgcatattaagcacttacatggtattgtcactgatgggtatgcg
ttttttactaatacccttgtgaggattgttgatgaattgtatgaaaagcttgtcgattcg
gttagggttcagctgatttggattactttggaaatgattgatgtttcggctattggattt
cagggtttgttggtggccctcttgaggcaaattgttggtggggattttagtgataagaat
ttatggttgtgttcggagttggttcgtattttttttgccaaatgggattgtttgttagaa
gaagaatcattggttttgaccagtgctttgtatgtatttcttaggctattggcagatcat
tgtaggcttgtgggtaatttaaaggttgaattgttgaaaaaaatggagattgatttttgt
gttagacttttgagggagaggtttcatttgtgtatgatgatagggagggatcttgttagg
cttttacaagaactggttcatgtacccgagtttcgagccatatggaaggacttgatgttg
agcccaagtgaatttaaagttcctgagtttcgagatatttctcagctttaccgtgtaagg
acatcgagtaggtactttttgcttcgtataacacctgtgatggagtcacagttgcgcttt
ttgcttagtgatgtcaagtttggtaatcacagaaggtaccaggtctggtttggaaagaag
tttctttgcacagcagagaaggagactcttcttattgacatagttagatttatctgttgt
tcacatcacccacctaatgaaattatattatcggacataattcccagatgggctgtcatt
ggctggttattgaaatgctgtaggaagaattatgtggaggctagtgttaaactggcactc
ttttatgattggcttttctttgatgagaacatggacaatgttatgaatattgagcctgca
ttcctactgatggtcaactcaatgtccaaatatattgaaatgacacatatgcttctagat
tttttgctccttgtagtaaataactatgatacagaaaggagggaaactattgttcagggc
gttcaatcatccttcgatgtacttgttaggagaggcgtggttcagtctctggatgttttg
atttcttctgataagctttttccttttcttaaagagagaattgtaaagctgttatcagag
agaaaagtgacctcgttagaaaatctccaggctggtagttttcgtggatccacttcctta
ccagatcatcctgctgcagttaggatggaatccggaacattacaacatgacatgtctgca
tctgcaagccagaatgatgtagaattgggcccccctactaatgttacttcttgttctcca
ctagcagagaatgatgacatccatcaacaaagtttagaatctctagtccagaatctagga
aaacatatccgaagttcaaaacaaatgggcatgcaagcactagacaagatactgcactta
tatgttaacctatcttctaaagcagaaaccaccaatttctctattagccctaatcagtta
tctagtataattgcaaaggaatttcagtacagtggtaaccagctgtttgaacaaaactgg
gatcaggaccttcagtctgcatcagccataataatacggcacttcatgttttctcagcat
gagacattgctaggtatgcttttgtgttggaatagagatggtcttactgttgggccttgc
ttcttggcttatgcaataaatcttgctcacgaggctcatgttctgggttatgtcacacat
cccaataccgttgcccatcccgacactctgagagactctaacaagacaacagattctgga
atgtccctgctgaaatatcattgtgagcagtattgttgttttgtgaacaaaggaaaggat
ctttctcaagctattatttctacttcgagtattaacgtcaaattagtaactaccttgatc
gagggtgcatttgctgcctataggggctttaatatgcataggggaagggaacttgctcca
aactctgataattatttgccgaagatactttactgtgatctgatgtcctatgccaaacag
gataatagaattttgaaattttcactgtacggtatctcatctaatcttcgtgacttattt
ttgtgtgaggaaaacataatgaagtcaatagtgagtcagttggactattctgatcttctt
gacatacaatttgatttaggatcgaaaaaactatccatatttggggacagcattgaagct
atatctcatttaatcagaagttcttttcaatgggagtgtatcgaacaacacaacttctgg
ggattgctgagatcagagcttgcagtttctgaggttccaaaagaaaaggtgctgttggaa
tttttctgcactgatggcttagatcctaagatttcctccattgctgttggtgggctcttg
gcactgtgcagctctcttgcacctacacctgatcttgttggagcagttcttttactacct
aataaaatatttaccaactttgctactacagttctatctgcttgggctgtgtccaatacc
tcaatgttgtttactagtctggctgaatttatggataagattaatgctggggattccatg
attcctgatctgagtgagataatgatcaataactctgccttcatatggttactgaatttt
ctggatgcaaaaaggaatgaaaagcaacaactttag
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