KEGG   Daucus carota (carrot): 108193846
Entry
108193846         CDS       T05350                                 
Name
(RefSeq) uncharacterized protein LOC108193846
  KO
K03868  E3 ubiquitin-protein ligase RBX1 [EC:2.3.2.32]
Organism
dcr  Daucus carota (carrot)
Pathway
dcr03420  Nucleotide excision repair
dcr04120  Ubiquitin mediated proteolysis
dcr04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:dcr00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    108193846
   04120 Ubiquitin mediated proteolysis
    108193846
  09124 Replication and repair
   03420 Nucleotide excision repair
    108193846
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:dcr04121]
    108193846
   03400 DNA repair and recombination proteins [BR:dcr03400]
    108193846
Enzymes [BR:dcr01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.32  cullin-RING-type E3 NEDD8 transferase
     108193846
Ubiquitin system [BR:dcr04121]
 Ubiquitin ligases (E3)
  UBL E3 ligases
   108193846
  Multi subunit type E3
   SCF complex
    Ring finger protein
     108193846
   Cul2 complex
     108193846
   Cul3 complex
     108193846
   Cul4 complex
     108193846
   Cul7 complex
     108193846
   Cul8 complex
     108193846
   Cul9 complex
     108193846
DNA repair and recombination proteins [BR:dcr03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      108193846
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      108193846
SSDB
Motif
Pfam: zf-rbx1 zf-ANAPC11 zf-RING_2 zf-C3HC4 zf-C3HC4_2 zf-RING_11
Other DBs
NCBI-GeneID: 108193846
NCBI-ProteinID: XP_017216167
UniProt: A0AAF0XN40
LinkDB
Position
7:41444317..41447230
AA seq 117 aa
MASAGEAGGVVVGQPSSSSSSSKKAAASKRFDIKKWNAVSLWAWDIVVDNCAICRNHIMD
LCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNSEWEFQKYGH
NT seq 354 nt   +upstreamnt  +downstreamnt
atggcatccgccggagaagcaggtggcgttgtggtgggacagccttcatcctcgtcgtca
tcttcaaagaaagcagcagcatcaaagcgcttcgatatcaagaagtggaacgccgtctct
ctctgggcttgggatatcgttgttgataactgtgctatctgcaggaatcatatcatggat
ctctgcattgaatgccaagctaatcaggctagtgcaaccagtgaggagtgcactgttgct
tggggtgtgtgcaatcacgctttccatttccactgcatcagcaggtggctaaaaactcgt
caagtgtgtcctcttgataatagtgagtgggagtttcagaagtatggccactag

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