Daucus carota (carrot): 108194001
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Entry
108194001 CDS
T05350
Name
(RefSeq) transcription factor PIF7
KO
K16189
phytochrome-interacting factor
Organism
dcr
Daucus carota (carrot)
Pathway
dcr04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
108194001
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
dcr03000
]
108194001
Transcription factors [BR:
dcr03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
108194001
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
HLH
bHLH_SAC51
bHLH_LHW
Motif
Other DBs
NCBI-GeneID:
108194001
NCBI-ProteinID:
XP_017216368
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All DBs
Position
7:38163721..38166497
Genome browser
AA seq
452 aa
AA seq
DB search
MSRKEYTVPKGDLWGHLRQAEKVGEETEGNRRSSHVHDHQKSYNHLVCMSNYDITELGWE
NGQPLMHEHVGILPAVPDSKTTWDRTDDTLESIVHQATYPNVNLPEFDHHLNQNHQLTNK
NSIVTPSTRIWGENSNHVEMSPPVYTKKRVQSSEHSDQCRGMNNLTISHQNHADKRPCGS
GNATFAKNNDATMMTWASLESPRSMRSKTKPVDEDSACHAGSEIPDEEPVNKGETAPSHS
SKRSRVAAVHNQSERKRRDRINQKMKTLQRLVPNANKTDKASMLDEVIEHLKQLQAQVQM
MSSRNIPHMMMPLGMQQQLQMSLLARMGMGAAPGLNFGSMLDMTNIARTASQPHPSLIHP
NSATTAVTPTFIPPQFMFPPMISRQVQSQANMVQEATGTNPVPFSDPYRALLTQSMNMEL
NNKMAAAVYQQQLNQAAQTTNGTSNPKHVQRE
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
atgagtagaaaggaatacacagtaccgaagggtgatttatgggggcacttaagacaagca
gagaaagttggagaagaaactgaaggaaacagaaggtcgtcgcatgtgcacgaccatcag
aagtcctacaatcatcttgtctgcatgtcaaattatgatatcaccgagctgggatgggag
aatggccagccattaatgcatgaacatgtggggatccttccagctgttccagattcaaaa
accacatgggataggaccgacgatacacttgagtccattgttcatcaagctacatacccg
aatgtaaacttgcctgaatttgatcatcacctgaatcaaaatcatcaattgacaaacaag
aactccattgtcacaccctctaccagaatatggggcgaaaattccaaccacgtagaaatg
agtcccccggtgtacaccaagaagcgggtccaatcatcagaacactcagatcaatgtaga
ggaatgaataacttgaccattagtcaccagaatcacgctgataaaaggccatgtggcagt
ggcaatgcaacctttgctaaaaacaatgatgcaactatgatgacatgggcttctctcgaa
tctcctaggagcatgagatcgaaaactaagcctgtggatgaggattcagcttgccatgct
ggatcagaaattccagatgaagagcctgtgaacaagggtgaaacagctccatcccactca
agtaaacgaagcagagtagctgctgttcataatcaatcagaaaggaaacgtagagacagg
atcaaccagaagatgaaaactctgcagaggctggtgcctaatgcaaataagactgataaa
gcttcgatgcttgatgaggtaatcgagcacttaaaacaacttcaagcacaagttcagatg
atgagttctagaaatataccccatatgatgatgcctctaggaatgcagcaacagctacag
atgtctcttcttgcacggatgggaatgggtgctgccccggggttgaattttgggtcgatg
cttgacatgactaacatagctcgaactgcatctcaacctcatccttccttaatccaccct
aactctgccaccacagcggttactcccacatttattccgccacagtttatgtttccaccc
atgatttccagacaagtccagtcacaagcaaacatggttcaggaagctacaggcaccaat
cctgtcccattcagtgatccatacagagcactgctgacgcaatccatgaatatggaactc
aacaacaagatggctgcagcggtctatcagcaacaacttaatcaggcagcacagacaaca
aatggcacttcaaacccaaaacatgtacaaagagaatga
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