Daucus carota (carrot): 108197367
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Entry
108197367 CDS
T05350
Name
(RefSeq) ataxin-3 homolog
KO
K11863
ataxin-3 [EC:3.4.22.-]
Organism
dcr
Daucus carota (carrot)
Pathway
dcr04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
108197367
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
dcr01002
]
108197367
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
dcr04121
]
108197367
Peptidases and inhibitors [BR:
dcr01002
]
Cysteine peptidases
Family C86
108197367
Ubiquitin system [BR:
dcr04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
MJD
108197367
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Josephin
UIM
UIM_2
Motif
Other DBs
NCBI-GeneID:
108197367
NCBI-ProteinID:
XP_017220449
UniProt:
A0A175YJK6
LinkDB
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Position
8:1243487..1246983
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AA seq
277 aa
AA seq
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MEGPINGGMLYHEVQESKLCAVHCVNTVLQGPFFSEFDLAALASDLDRTERQMMLGGAQS
DAFVAEESHNVSLDGDFSIQVLQKALEVWDLQVIPLNSPVAEPAQIDPELEKAFICHLQD
HWFCIRKVNGEWYNFDSLYAAPEHLSKFYLSAYLDSLKGFGWSIFLVRGNFPKECPISSS
EASNVFGQWLLPEDAERIIKSCNTAQRTPDRTTRVQQQQDQFPQYGAESPSDAEDEDLKA
AIAASLMDSLPATVAPKAETGASETENKDTVEKKHDD
NT seq
834 nt
NT seq
+upstream
nt +downstream
nt
atggaaggcccaattaacggcggcatgttgtatcacgaagttcaagaatcgaagctctgc
gctgtacattgtgtaaacacagttctacaaggccctttcttttcggaattcgatttggcg
gctctcgcttccgatctcgatcgcacggagcggcagatgatgctcggaggagctcagagt
gacgcgtttgtggcggaagagtcgcataatgtgtcgctcgatggcgattttagtattcag
gttttacaaaaagctttggaagtgtgggatctgcaagtaattcctctcaacagccctgtg
gccgaacctgctcagattgacccagagcttgagaaggcatttatttgtcatttacaagac
cattggttttgtatcaggaaagtgaacggagagtggtacaattttgatagtctctatgca
gcgccagagcatctttccaagttttacctttcagcctatcttgattctttaaaaggcttt
ggctggagtatatttttagtgaggggaaatttcccaaaggagtgtcccatttcatcctca
gaggcttctaatgtttttgggcagtggttattacccgaagatgcggagagaataataaaa
tcctgcaacactgcacaaagaacgcctgacagaactactcgagtccagcagcaacaggat
cagtttcctcaatacggagcagaatcaccctcagatgcagaggacgaagatctaaaagct
gcaatagccgcaagcttgatggattccttgcctgcaacagttgctcccaaagcggaaact
ggtgcctccgagacggaaaataaggacaccgtggagaaaaagcatgatgactga
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