Daucus carota (carrot): 108199225
Help
Entry
108199225 CDS
T05350
Name
(RefSeq) alpha-farnesene synthase
KO
K14173
alpha-farnesene synthase [EC:
4.2.3.46
]
Organism
dcr
Daucus carota (carrot)
Pathway
dcr00909
Sesquiterpenoid and triterpenoid biosynthesis
dcr01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00909 Sesquiterpenoid and triterpenoid biosynthesis
108199225
Enzymes [BR:
dcr01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.3 Acting on phosphates
4.2.3.46 alpha-farnesene synthase
108199225
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Terpene_synth_C
Terpene_syn_C_2
Terpene_synth
DUF5769
DUF3456
Motif
Other DBs
NCBI-GeneID:
108199225
NCBI-ProteinID:
XP_017222440
LinkDB
All DBs
Position
8:complement(28619099..28622659)
Genome browser
AA seq
562 aa
AA seq
DB search
MESKNGGLLADHDRGKYDSSQVHAMIAETDQIQKTGVYRPNIWKYDRIEALRNEYADEKY
ERMLGKLIGEVQGLLSNTADTWEKLELLDNMEKLGLTYLFEHEIKKVLDTLVSNNNLNLD
GEKDLYNTALFFTVLRKHGFHVSQDMFADLVDNTHSDMKAMLKLFEASHLAFEGENILDR
ANLISRNYLKSIGSSAEDASLANVTRSLKDPYNIWYNVKTQIRFHGKNTNSSSHLLNLAR
YNFNMIQATHQKEVKELLRWWKALDLKRSLPFIRNRVMESFVCAVGIVSEPKYGSLRNWL
TKSITLILVLDDVFDASGCTLEELENFTSALNRWDGEQNEKLSAGMNICLQTLYDTIKNI
ASEIEDVYGWNSVSPHLQKAWTTFCQSMLKEARWFNTKYTPSLKEHTDNGRNSSSGPLLS
LHIFFALVTKTEPNQVIELLQCTAKHQHNVALIFRLCNDLGNYAVEIERSDASSSIQCIM
QEQGVSEEVARDQIKHMIANAWKKINYQCQTQSPLLQPYLKYSANIARVAHVVYHNGDGV
SNADGMTRNQVMDLLSEPLLLT
NT seq
1689 nt
NT seq
+upstream
nt +downstream
nt
atggagtccaaaaatggaggccttctagctgatcatgatcgcggaaaatatgactcttct
caagttcatgccatgatagctgagactgatcaaatccagaaaactggtgtctacagaccg
aatatctggaaatatgatcgtatcgaggcccttagaaatgaatatgctgatgagaaatac
gaaagaatgctagggaagctgataggggaagtacagggcctcctttctaatacagctgac
acttgggaaaagttggagcttcttgacaacatggaaaaacttggcttgacctatctcttt
gagcatgaaatcaagaaagttttagacacattagtgtccaacaacaacttgaatcttgat
ggtgaaaaggatctttacaatactgctctattttttacagtcctccgtaaacatggcttc
catgtctctcaagatatgtttgcagacctggtggataatacacattcggatatgaaagct
atgctcaagcttttcgaagcatctcatcttgccttcgaaggcgaaaacatattggacaga
gcaaatttgatttcaagaaattacctcaagagcatcggctcatctgcagaagatgcttct
cttgctaatgtaacccgcagtttaaaagacccgtataacatttggtacaatgtcaagaca
caaatacgatttcacggaaaaaataccaactccagctctcatttactcaatctagccagg
tacaacttcaacatgattcaggccacacatcaaaaggaagtaaaagagctgttaaggtgg
tggaaggcactagacttgaaaagaagtttaccattcatcagaaatagagtaatggaaagc
tttgtgtgtgcagttggaattgtttctgaaccgaaatatggaagcttgaggaattggtta
acgaaaagcattacactaatactagtgctagatgatgtttttgatgcatctggttgcact
ttggaggaactggaaaactttactagtgctctaaacaggtgggatggtgagcaaaatgaa
aaactttcagcgggtatgaacatttgtctgcagactttgtatgataccatcaagaacatt
gcatccgaaatcgaggatgtgtatggttggaattctgtttcacctcatttacagaaagcg
tggacaacattttgccagtcaatgctgaaggaagcaaggtggtttaacacgaaatacaca
ccatcactgaaagagcatactgacaacggacggaactcctcgtctggtcctttactgtct
cttcatatattcttcgcgcttgtaaccaaaaccgaaccaaatcaagtcattgagcttctc
caatgcacagccaaacaccaacacaatgtggcgctcatctttcggctatgcaacgacttg
ggaaattatgcagtagaaattgaaagaagtgatgcttcatcatcgatccagtgcattatg
caagaacaaggtgtttcagaagaagtagctcgagatcagatcaaacacatgatagctaat
gcatggaagaagatcaattatcagtgccaaacacaatctccattgttgcaaccatacctc
aagtactcggcaaatattgcgagagtggcacatgttgtgtatcataacggagatggggtt
tcgaatgcggatggcatgacccggaaccaagtcatggatctcctcagtgaacctcttcta
ctcacctga
DBGET
integrated database retrieval system
