Daucus carota (carrot): 108211059
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Entry
108211059 CDS
T05350
Name
(RefSeq) RING-box protein 1a-like
KO
K03868
E3 ubiquitin-protein ligase RBX1 [EC:
2.3.2.32
]
Organism
dcr
Daucus carota (carrot)
Pathway
dcr03420
Nucleotide excision repair
dcr04120
Ubiquitin mediated proteolysis
dcr04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
108211059
04120 Ubiquitin mediated proteolysis
108211059
09124 Replication and repair
03420 Nucleotide excision repair
108211059
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
dcr04121
]
108211059
03400 DNA repair and recombination proteins [BR:
dcr03400
]
108211059
Enzymes [BR:
dcr01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.32 cullin-RING-type E3 NEDD8 transferase
108211059
Ubiquitin system [BR:
dcr04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
108211059
Multi subunit type E3
SCF complex
Ring finger protein
108211059
Cul2 complex
108211059
Cul3 complex
108211059
Cul4 complex
108211059
Cul7 complex
108211059
Cul8 complex
108211059
Cul9 complex
108211059
DNA repair and recombination proteins [BR:
dcr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
108211059
TCR (transcription coupled repair) factors
Cul4-CSA complex
108211059
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-rbx1
zf-ANAPC11
zf-RING_2
zf-C3HC4
zf-C3HC4_2
zf-RING_11
zf-RING_16
Motif
Other DBs
NCBI-GeneID:
108211059
NCBI-ProteinID:
XP_017238036
UniProt:
A0AAF0WNX2
LinkDB
All DBs
Position
3:complement(38957794..38959457)
Genome browser
AA seq
120 aa
AA seq
DB search
MASVSTDVNMVSAAEASTVSTSSSSAIRKANKRLEIKKWNAVSLWAWDIVVDNCAICRNH
IMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNSEWEFQKYGH
NT seq
363 nt
NT seq
+upstream
nt +downstream
nt
atggcttctgtgagcaccgatgtgaacatggtttctgcagccgaggcttcaacggtttca
acatcatcatcatctgccattagaaaagctaataagcgtttggagatcaaaaagtggaac
gctgtgtctctctgggcctgggatattgtggtggataattgtgctatttgcaggaatcat
atcatggatctttgtatcgagtgtcaagctaaccaagctagcgctacaagtgaggagtgc
actgtggcttggggggtctgcaaccatgcatttcacttccactgcatcagtcgatggctg
aaaacccgacaagtatgtccattagataacagcgaatgggaatttcagaagtacggtcat
taa
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