KEGG   Daucus carota (carrot): 108211059
Entry
108211059         CDS       T05350                                 
Name
(RefSeq) RING-box protein 1a-like
  KO
K03868  E3 ubiquitin-protein ligase RBX1 [EC:2.3.2.32]
Organism
dcr  Daucus carota (carrot)
Pathway
dcr03420  Nucleotide excision repair
dcr04120  Ubiquitin mediated proteolysis
dcr04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:dcr00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    108211059
   04120 Ubiquitin mediated proteolysis
    108211059
  09124 Replication and repair
   03420 Nucleotide excision repair
    108211059
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:dcr04121]
    108211059
   03400 DNA repair and recombination proteins [BR:dcr03400]
    108211059
Enzymes [BR:dcr01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.32  cullin-RING-type E3 NEDD8 transferase
     108211059
Ubiquitin system [BR:dcr04121]
 Ubiquitin ligases (E3)
  UBL E3 ligases
   108211059
  Multi subunit type E3
   SCF complex
    Ring finger protein
     108211059
   Cul2 complex
     108211059
   Cul3 complex
     108211059
   Cul4 complex
     108211059
   Cul7 complex
     108211059
   Cul8 complex
     108211059
   Cul9 complex
     108211059
DNA repair and recombination proteins [BR:dcr03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      108211059
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      108211059
SSDB
Motif
Pfam: zf-rbx1 zf-ANAPC11 zf-RING_2 zf-C3HC4 zf-C3HC4_2 zf-RING_11 zf-RING_16
Other DBs
NCBI-GeneID: 108211059
NCBI-ProteinID: XP_017238036
UniProt: A0AAF0WNX2
LinkDB
Position
3:complement(38957794..38959457)
AA seq 120 aa
MASVSTDVNMVSAAEASTVSTSSSSAIRKANKRLEIKKWNAVSLWAWDIVVDNCAICRNH
IMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNSEWEFQKYGH
NT seq 363 nt   +upstreamnt  +downstreamnt
atggcttctgtgagcaccgatgtgaacatggtttctgcagccgaggcttcaacggtttca
acatcatcatcatctgccattagaaaagctaataagcgtttggagatcaaaaagtggaac
gctgtgtctctctgggcctgggatattgtggtggataattgtgctatttgcaggaatcat
atcatggatctttgtatcgagtgtcaagctaaccaagctagcgctacaagtgaggagtgc
actgtggcttggggggtctgcaaccatgcatttcacttccactgcatcagtcgatggctg
aaaacccgacaagtatgtccattagataacagcgaatgggaatttcagaagtacggtcat
taa

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